Brian D Aevermann

occupation: výzkumník

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Articles 22

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2007-10-17

A comparative genomic analysis of the small heat shock proteins in Caenorhabditis elegans and briggsae

Brian D Aevermann
2008-02-26

Comparative analysis of the small heat shock proteins in three angiosperm genomes identifies new subfamilies and reveals diverse evolutionary patterns

Brian D Aevermann
2014-10-14

A comprehensive collection of systems biology data characterizing the host response to viral infection.

Qibin Zhang, Laurence Josset, Vincent C. Tam, Vineet D. Menachery, Samuel Owen Purvine, Tom Metz, Katrina M. Waters, Jason McDermott, Paul G. Thomas, Ralph S. Baric, Jošihiro Kawaoka, Michael Katze, Athena A Schepmoes, Susan C Tilton, Brian D Aevermann, Richard H. Scheuermann, Lisa E. Gralinski, Boyd L Yount, Marina A. Gritsenko, Therese R. W. Clauss, Masato Hatta, Gabriele Neumann, Amy C Sims, Armand R Bankhead, Shannon K. McWeeney, Richard D. Smith, Hugh Mitchell (politician), Amie J Eisfeld, Melissa M Matzke, Nicolas Tchitchek, Robert A Heegel, Sudhakar Agnihothram, Victoria Carter, Shufang Fan, Martin T Ferris, Jöns Jacob Berzelius, Sophia Jeng, Shari M Kaiser, Lynn Law, Matthew E Monroe, Carrie M Rosenberger, Pavel Sova, Allison L Totura, Bobbie-Jo Webb-Robertson, Alan Aderem
2015-03-04

Diversifying Selection Analysis Predicts Antigenic Evolution of 2009 Pandemic H1N1 Influenza A Virus in Humans

Richard H. Scheuermann, Alexandra J Lee, Brett E Pickett, Suman Ranjan Das, Brian D Aevermann
2016-02-18

Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons

Jennifer Erwin, F. Gage, Jeremy Miller, Ed S Lein, Rebecca D Hodge, Brian D Aevermann, Richard H. Scheuermann, Roger S Lasken, Mark J Novotny, Nicholas J. Schork
2016-09-26

Influenza Research Database: An integrated bioinformatics resource for influenza virus research

Christopher N. Larsen, Tavis K Anderson, David F Burke, Alexandra J Lee, Brett E Pickett, Brian D Aevermann, Richard H. Scheuermann, Catherine Macken, Amy L Vincent
2017-01-01

PRODUCTION OF A PRELIMINARY QUALITY CONTROL PIPELINE FOR SINGLE NUCLEI RNA-SEQ AND ITS APPLICATION IN THE ANALYSIS OF CELL TYPE DIVERSITY OF POST-MORTEM HUMAN BRAIN NEOCORTEX

Trygve E. Bakken, Rebecca D Hodge, Brian D Aevermann, Richard H. Scheuermann, Roger S Lasken, Jeremy Miller, Frank J Steemers, Mark J Novotny, Nicholas J. Schork
2017-12-21

Cell type discovery and representation in the era of high-content single cell phenotyping

Trygve E. Bakken, Alexandra J Lee, Bali Pulendran, Jeremy Miller, Ed S Lein, Rebecca D Hodge, Brian D Aevermann, Richard H. Scheuermann, Roger S Lasken, Mark J Novotny, Nicholas J. Schork
2018-05-01

Cell type discovery using single-cell transcriptomics: implications for ontological representation

Richard H. Scheuermann, Trygve E. Bakken, David Osumi-Sutherland, Alexander D Diehl, Jeremy Miller, Ed S Lein, Brian D Aevermann, Roger S Lasken, Mark J Novotny
2018-08-27

Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type

Trygve E. Bakken, Francisco Diez-Fuertes, Gábor Molnár, Attila Ozsvár, Ed S Lein, Gábor Tamás, Jeremy Miller, Rebecca D Hodge, Brian D Aevermann, Richard H. Scheuermann, Roger S Lasken, Frank J Steemers, Mark J Novotny, Nóra Faragó, László G Puskás, Soraya I Shehata, Zoe Maltzer, Jennie L Close, Nicholas J. Schork
2018-12-26

Single-nucleus and single-cell transcriptomes compared in matched cortical cell types

Trygve E. Bakken, Thuc Nghi Nguyen, Jeff Goldy, Lucas T. Graybuck, Richard H. Scheuermann, Hongkui Zeng, Jeremy Miller, Ed S Lein, Rebecca D Hodge, Brian D Aevermann, Roger S Lasken, Bosiljka Tasic, D. Bertagnolli, Amy Bernard, Tamara L Casper, Zizhen Yao, Matthew Kroll, Soraya I Shehata, Christine Rimorin, Sheana Parry, Eliza Barkan, Emma Garren, Kanan Lathia, Nicholas J. Schork
2019-08-21

Conserved cell types with divergent features in human versus mouse cortex

Rebecca D Hodge, Trygve E. Bakken, Brian R. Long, Andrew L Ko, Hongkui Zeng, Jeremy Miller, Ed S Lein, Brian D Aevermann, Richard H. Scheuermann, Bosiljka Tasic, D. Bertagnolli, Amy Bernard, Rafael Yuste, Christof Koch, Richard Ellenbogen, Lucas T. Graybuck, Kimberly A Smith, Osnat Penn, Zizhen Yao, Soraya I Shehata, Krissy Brouner, Tamara L Casper, N. Dee, Jeff Goldy, Aaron Szafer, Elliot R Thomsen, Susan Sunkin, David Feng, Lydia Ng, Michael Hawrylycz, John W Phillips, Boudewijn Lelieveldt, Rachel Dalley, Christine Rimorin, Jennie L Close, Saroja Somasundaram, Medea McGraw, Sheana Parry, Eliza R Barkan, Emma Garren, Allison Beller, Olivia Fong, Kanan Lathia
2020-03-03

Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons

Rebecca D Hodge, Brian E Kalmbach, Trygve E. Bakken, Soraya I Shehata, Amy Bernard, Christof Koch, Richard H. Scheuermann, Ed S Lein, Jeremy Miller, Brian D Aevermann, Roger S Lasken, Frank J Steemers, Mark J Novotny, Eliza R Barkan, Anna Marie Yanny, Nicholas J. Schork
2020-10-27

Integrated Single-Cell Atlases Reveal an Oral SARS-CoV-2 Infection and Transmission Axis

Blake M Warner, Kevin M Byrd, Brian D Aevermann, Richard H. Scheuermann, Sarah Teichmann, Stephen M. Hewitt, David E. Kleiner, Stefania Pittaluga, Alison Grazioli, Adam Kimple, Mark J Novotny
2020-11-30

FR-Match: robust matching of cell type clusters from single cell RNA sequencing data using the Friedman-Rafsky non-parametric test

Ed S Lein, Trygve E. Bakken, Richard H. Scheuermann, Rebecca D Hodge, Brian D Aevermann, Jeremy Miller
2020-11-04

Systems Biology Methods Applied to Blood and Tissue for a Comprehensive Analysis of Immune Response to Hepatitis B Vaccine in Adults

Richard H. Scheuermann, Brian D Aevermann, Dennis R. Burton, Shane Crotty, Darragh Duffy, Mark J Novotny, Tobias Kollmann, Casey P. Shannon, Elise Landais
2020-04-01

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

Ed S Lein, Trygve E. Bakken, Aviv Regev, Evan Z Macosko, Bosiljka Tasic, Sten Linnarsson, Lucas T. Graybuck, Tamara L Casper, Peter V Kharchenko, Patrick R Hof, Brian D Aevermann, Richard H. Scheuermann, Hongkui Zeng, Sebastian Preissl, Jacinta Lucero, Michael Hawrylycz, Zizhen Yao, Brian E Kalmbach, Fenna M Krienen, Jesse Gillis, Staci Sorensen, Alexander Dobin
2021-05

SARS-CoV-2 infection of the oral cavity and saliva

Mark J Novotny, Brian D Aevermann, Richard H. Scheuermann
2021-06-04

A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing

Trygve E. Bakken, Jeremy Miller, Brian D Aevermann, Rebecca D Hodge, Ed S Lein, Richard H. Scheuermann, Boudewijn Lelieveldt, Mark J Novotny
2021-10-29

Machine Learning-Based Single Cell and Integrative Analysis Reveals That Baseline mDC Predisposition Correlates With Hepatitis B Vaccine Antibody Response

Brian D Aevermann, Richard H. Scheuermann, Tobias Kollmann, Casey P. Shannon
2022-02-01

The genome and preliminary single-nuclei transcriptome of Lemna minuta reveals mechanisms of invasiveness

Todd P Michael, Mark J Novotny, Brian D Aevermann, Richard H. Scheuermann
2023-11-02

CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

Brian D Aevermann, Pedro Henrique Ribeiro de Assis, Sidney M Bell, Batuhan Cakir, J. Michael Cherry, Jennifer Chien, Jason Hilton, Norbert K Tavares

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Brian D Aevermann

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