Matthew Berriman

2000 -

occupation: researcher

award received: C.A. Wright Memorial Medal

official website: www.sanger.ac.uk/people/directory/berriman-matt

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Articles 200

Date

Title

Authors

2022-02-15

Hatching of parasitic nematode eggs: a crucial step determining infection

Richard K. Grencis, Matthew Berriman, Maria A Duque-Correa
2021-08-06

Whole-genome sequencing of Schistosoma mansoni reveals extensive diversity with limited selection despite mass drug administration

Duncan J Berger, Thomas Crellen, Poppy Lamberton, Alan Tracey, Jennifer D Noonan, Joanne P. Webster, Matthew Berriman, James A. Cotton
2021-05-18

Mapping Rora expression in resting and activated CD4+ T cells

Johan Henriksson, Zhichao Miao, Jillian L Barlow, Evelina Charidemou, Valentina Proserpio, Matthew Berriman, John Marioni, Sarah Teichmann, Liora Haim-Vilmovsky
2020-09-21

Ecological divergence and hybridization of Neotropical Leishmania parasites

Frederik Van den Broeck, Nicholas J Savill, Hideo Imamura, David Santos-Mateus, Vanessa Adaui, Jorge Arevalo, Alejandro Llanos-Cuentas, Elisa Cupolillo, Michael Miles, Matthew Berriman, Achim Schnaufer, James A. Cotton, Jean-Claude Dujardin
2020-09-01

Large-scale RNAi screening uncovers therapeutic targets in the parasite Schistosoma mansoni

Jipeng Wang, Carlos Paz, Gilda Padalino, Avril Coghlan, Zhigang Lu, Matthew Berriman, James J. Collins III
2020-11-09

Complete representation of a tapeworm genome reveals chromosomes capped by centromeres, necessitating a dual role in segregation and protection

Matthew Berriman, Alan Tracey
2020-11-09

Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm

Stephen R. Doyle, Alan Tracey, Roz Laing, Jennifer D Noonan, Faye H Rodgers, Janneke Wit, Eileen Devaney, Matthew Berriman, John Gilleard
2020-11-30

Population genomic evidence that human and animal infections in Africa come from the same populations of Dracunculus medinensis

Elizabeth A Thiele, Guillaume Sallé, Alan Tracey, Michael J Yabsley, Matthew Berriman, James A. Cotton, Christopher A Cleveland, Albrecht Schulte-Hostedde
2020-11-30

Extracellular non-coding RNA signatures of the metacestode stage of Echinococcus multilocularis

María Eugenia Ancarola, Gabriel Lichtenstein, Nancy Holroyd, Mara Mariconti, Matthew Berriman, Antonio Marcilla, Klaus Brehm, Marcela Cucher, Laura Kamenetzky
2020-08-14

Author Correction: Genomes of all known members of a Plasmodium subgenus reveal paths to virulent human malaria

Thomas D Otto, Aude Gilabert, Christophe Paupy, Matthew Berriman, Franck Prugnolle, François Renaud, Ulrike Böhme, Céline Arnathau, Eric Willaume, Alain Prince Okouga, Benjamin Ollomo, Barthélémy Ngoubangoye
2020-03-25

Global genome diversity of the Leishmania donovani complex

Susanne U Franssen, Tim Downing, Hideo Imamura, Jean-Claude Dujardin, Isabel L. Mauricio, Abedelmajeed Nasereddin, Matthew Berriman, James A. Cotton
2020-04-20

Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani

James A. Cotton, Matthew Berriman, Matthew Yeo, Petr Volf
2020-04-23

Sex chromosome evolution in parasitic nematodes of humans

Jeremy M Foster, Alan Tracey, Yu-Chih Tsai, Matthew Chung, Adam Geber, Jonas Korlach, Yichao Li, Sara Lustigman, Lonnie Welch, Matthew Berriman, Julie C Dunning Hotopp, Elodie Ghedin, John S A Mattick
2020-05-06

Transcriptome of the parasitic flatworm Schistosoma mansoni during intra-mammalian development

Arporn Wangwiwatsin, Nancy Holroyd, Michael J. Doenhoff, Matthew Berriman
2020-06-11

Nearly Complete Genome Sequence of Brugia malayi Strain FR3

Matthew Chung, Julie C Dunning Hotopp, John S A Mattick, Alan Tracey, Matthew Berriman
2020-08-03

Genomic and transcriptomic evidence for descent from Plasmodium and loss of blood schizogony in Hepatocystis parasites from naturally infected red colobus monkeys

Eerik Aunin, Ulrike Böhme, Theo Sanderson, Tony L Goldberg, Nelson Ting, Colin A. Chapman, Chris Newbold, Matthew Berriman, Adam J Reid
2020-07-23

Large CRISPR-Cas-induced deletions in the oxamniquine resistance locus of the human parasite Schistosoma mansoni

Patrick Driguez, Alan Tracey, Matthew Berriman, Gabriel Rinaldi
2019-01-09

Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani

Matthew Berriman, Petr Volf
2019-01-15

Programmed genome editing of the omega-1 ribonuclease of the blood fluke, Schistosoma mansoni

Wannaporn Ittiprasert, Shannon E Karinshak, Apisit Chaidee, Patrick Driguez, Karl F Hoffmann, Matthew Berriman, Paul J. Brindley, Alan Tracey
2019-01-14

Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection

Maria A Duque-Correa, Timothy P Jenkins, Werner Müller, Gordon Dougan, Matthew Berriman
2019-01-22

The Malaria Cell Atlas: a comprehensive reference of single parasite transcriptomes across the complete Plasmodium life cycle: file S1

Kedar N Natarajan, Julian Rayner, Haynes Heaton, Lisa H. Verzier, Tallulah Andrews, Andrew Russell, Matthew Berriman, Martin Hemberg, Mara Lawniczak
2019-05-28

Progression of the canonical reference malaria parasite genome from 2002-2019

Ulrike Böhme, Thomas D Otto, Chris Newbold, Matthew Berriman
2019-08-01

GeneDB and Wikidata

Magnus Manske, Ulrike Böhme, Matthew Berriman, Christoph Püthe
2019-12-03

Evolutionary analysis of the most polymorphic gene family in falciparum malaria

Thomas D Otto, Ulrike Böhme, Matthew Berriman, Chris Newbold
2019-10-22

The global diversity of Haemonchus contortus is shaped by human intervention and climate

Guillaume Sallé, Stephen R. Doyle, Matthew Berriman
2019-10-14

GeneDB and Wikidata

Magnus Manske, Ulrike Böhme, Christoph Püthe, Matthew Berriman
2019-10-16

Systematic screening of 96 Schistosoma mansoni cell-surface and secreted antigens does not identify any strongly protective vaccine candidates in a mouse model of infection

Cecile Crosnier, Matthew Berriman, Gavin J. Wright
2019-08-01

The Malaria Cell Atlas: Single parasite transcriptomes across the complete Plasmodium life cycle

Virginia M Howick, Andrew Russell, Tallulah Andrews, Haynes Heaton, Adam J Reid, Kedar N Natarajan, Lisa H. Verzier, Julian Rayner, Matthew Berriman, Jeremy K Herren, Oliver Billker, Martin Hemberg, Arthur M. Talman, Mara Lawniczak
2018-01-18

Tissue-specific transcriptome analyses provide new insights into GPCR signalling in adult Schistosoma mansoni

Matthew Berriman, Nic Wheeler, Arporn Wangwiwatsin, Aaron G Maule, Christoph G Grevelding
2018-03-02

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals.

Thomas D Otto, Matthew Berriman, Ulrike Böhme, Mandy Sanders, Samuel O. Oyola, Sylvain Gandon, Joseph M. Vinetz
2018-06-01

Genetic diversity of Cryptosporidium hominis in a Bangladeshi community as revealed by whole genome sequencing.

Matthew Berriman, Mandy Sanders, Tahmeed Ahmed, William A. Petri, Carol A Gilchrist, Rashidul Haque, Mamun Kabir, Masud Alam, Jennie Z Ma, Rachel M Chalmers
2018-03-27

Single-cell RNA-seq reveals hidden transcriptional variation in malaria parasites

Ana Rita Gomes, Christopher J R Illingworth, Oliver Billker, Matthew Berriman, Mara Lawniczak

Human - wd:Q28025032

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