Vincent Plagnol

Educated at: University of Southern California

Occupation: biostatistician

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Articles 134

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December 8, 2003

Markov chain Monte Carlo without likelihoods

Paul Marjoram, John Molitor, Vincent Plagnol, Simon Tavaré
2005

A method to address differential bias in genotyping in large scale association studies

Vincent Plagnol, John A. Todd
2005

Possible ancestral structure in human populations

Vincent Plagnol
July 2005

The pattern of polymorphism in Arabidopsis thaliana

Martin Kreitman, Vincent Plagnol, Vincent Schulz, Christopher Toomajian, Mattias Jakobsson, Theodore S Kalbfleisch, Noah Rosenberg
November 19, 2005

Relative influences of crossing over and gene conversion on the pattern of linkage disequilibrium in Arabidopsis thaliana

Vincent Plagnol
July 2006

Possible ancestral structure in human populations

Vincent Plagnol
August 5, 2007

Large-scale genetic fine mapping and genotype-phenotype associations implicate polymorphism in the IL2RA region in type 1 diabetes

Neil M Walker, Vincent Plagnol, Deborah Smyth, John A. Todd, Linda S Wicker
December 1, 2007

Interactions between Idd5.1/Ctla4 and other type 1 diabetes genes

Vincent Plagnol, John A. Todd
2007

A Genome-wide Assessment of the Genetic Basis of Type 1 Diabetes

Vincent Plagnol, David B. Dunger, John A. Todd
August 24, 2007

The Evolution of Selfing in Arabidopsis thaliana

Vincent Plagnol, Detlef Weigel
July 2007

Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes

Vincent Plagnol, Felicity Payne, Helen Schuilenburg, James E Allen, Oliver Burren, Deborah Smyth, Chris Wallace, Neil M Walker, David B. Dunger, John A. Todd, Joanna Howson, Helen E Stevens, Nigel R Ovington, Linda S Wicker, Jeffrey S Szeszko, Luc J Smink, Alex K Lam, Sarah Nutland, Cristian Guja, Constantin Ionescu-Tirgoviste, Kate Downes, Sergey Nejentsev, Jason P Hafler, Lauren R Zeitels, Jennie H M Yang, Adrian Vella, Gillian Coleman, Barry C Healy, Ellen C Adlem, Hin-Tak Leung, Matt Simmonds, Joanne M Heward
April 5, 2007

A method to address differential bias in genotyping in large-scale association studies

Vincent Plagnol, John A. Todd
August 5, 2007

Recombination and linkage disequilibrium in Arabidopsis thaliana

Vincent Plagnol, Detlef Weigel, Christopher Toomajian, Stephan Ossowski, Joseph R. Ecker
September 7, 2008

A robust statistical method for case-control association testing with copy number variation

Vincent Plagnol, Richard Redon, Tomas Fitzgerald, Chris Barnes, Jonathan Marchini
February 27, 2008

PTPN22 Trp620 explains the association of chromosome 1p13 with type 1 diabetes and shows a statistical interaction with HLA class II genotypes

Neil M Walker, Vincent Plagnol, Deborah Smyth, John A. Todd, Joanna Howson, Helen E Stevens
December 25, 2008

Shared and distinct genetic variants in type 1 diabetes and celiac disease

Vincent Plagnol, Cisca Wijmenga, Graham Heap, Deborah Smyth, Ross McManus, Neil M Walker, David A van Heel, John A. Todd, Joanna Howson, Helen E Stevens, Patrick J Dubois, Kate Downes, Jennie H M Yang, Triona O'Brien
November 2, 2008

Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci

Vincent Plagnol, James E Allen, Deborah Smyth, Neil M Walker, John A. Todd, Jeffrey Barrett, Kate Downes, Barry C Healy, Josyf C Mychaleckyj
August 13, 2008

Extreme clonality in lymphoblastoid cell lines with implications for allele specific expression analyses

Vincent Plagnol, Chris Wallace, John A. Todd
June 16, 2008

Copy number of FCGR3B, which is associated with systemic lupus erythematosus, correlates with protein expression and immune complex uptake

Vincent Plagnol, Naomi Mcgovern, Edwin R Chilvers, Gerard B Nash, Menna R Clatworthy, Paul A Lyons
October 30, 2008

CD226 Gly307Ser association with multiple autoimmune diseases

Vincent Plagnol, Jane Worthington, Anne Hinks
November 27, 2008

Statistical independence of the colocalized association signals for type 1 diabetes and RPS26 gene expression on chromosome 12q13.

Vincent Plagnol, Deborah Smyth, John A. Todd
2009

F.5. Cell-specific CD25 Expression is Determined by Type 1 Diabetes Associated IL2RA Haplotypes

Calliope A. Dendrou, Vincent Plagnol, Nicholas J. Wareham, Willem H. Ouwehand, John A. Todd, John R Bradley
August 2009

Detecting ancient admixture and estimating demographic parameters in multiple human populations

Vincent Plagnol, Kirk E. Lohmueller
May 10, 2009

Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes

Vincent Plagnol, Patrick Concannon, Beena Akolkar, Helen Schuilenburg, Deborah Smyth, Neil M Walker, Flemming Pociot, John A. Todd, Cécile Julier, Henry A. Erlich, Luis Castaño, Helen E Stevens, Stephen S Rich, Jeffrey Barrett, Grant Morahan, Concepcion Nierras, Type 1 Diabetes Genetics Consortium
January 1, 2009

Association tests and software for copy number variant data

Vincent Plagnol
November 17, 2009

Fluorescence intensity normalisation: correcting for time effects in large-scale flow cytometric analysis.

Vincent Plagnol, Calliope A. Dendrou, John A. Todd
August 23, 2009

Cell-specific protein phenotypes for the autoimmune locus IL2RA using a genotype-selectable human bioresource

Vincent Plagnol, Matthew Hardy, Calliope A. Dendrou, Oliver Burren, John R Bradley, Neil M Walker, Nicholas J. Wareham, Willem H. Ouwehand, John A. Todd, Linda S Wicker, Sarah Nutland, Kate Downes, Jennie H M Yang, Gillian Coleman, Barry C Healy
January 1, 2010

Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing

Vincent Plagnol, Graham Heap, Charles Mein, David A van Heel, Richard Dobson, Lude Franke, John A. Todd
March 2010

Variants génétiques associés au diabète de type 1 et contrôle de l’expression du récepteur de l’IL-2

Vincent Plagnol
April 1, 2010

Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls

Dominic P. Kwiatkowski, Panos Deloukas, Chris Tyler-Smith, Inês Barroso, Martin Farrall, Rhian Gwilliam, Jack Satsangi, Miles Parkes, Inga Prokopenko, Vincent Plagnol, Sarah Edkins, Anne Farmer, Eleftheria Zeggini, Naomi Hammond, Aarno Palotie, Sian Caesar, Katherine Gordon-Smith, Audrey Duncanson, Jane Worthington, Alastair Compston, Francesca Bredin, George Kirov, Mark Lathrop, Nazneen Rahman, Adam Auton, Simon Myers, Cecilia Lindgren, Paul Emery, Willem H. Ouwehand, Tomas Fitzgerald, James Lee, Paul Martin, Julian Maller, Dalila Pinto, Eleni Giannoulatou, Kimmo Palin, Oliver Burren, Anne Hinks, Richard Redon, John Bowes, Detelina Grozeva, Sarah E. Hunt, Louise Wain, Lynne J Hocking, Toby Johnson, Natalie J. Prescott, Chris Wallace, Neil M Walker, Hana Lango Allen, Chris Barnes, David M. Evans, William G. Newman, Mark Caulfield, Wendy Thomson, Matthew A. Brown, Ian Bruce, John D Isaacs, Alistair Scott Hall, Christopher G. Mathew, Gerome Breen, Anne Barton, Anna Dominiczak, Michael C O'Donovan, Gareth Evans, Michael N Weedon, Adrian V. S. Hill, Martin D Tobin, Stephen W. Scherer, Michael Andrew Quail, Armand Valsesia, Amanda J Bennett, Diana Eccles, Nilesh Samani, Nick Craddock, Richard D Pearson, Damjan Vukcevic, Jeffrey Barrett, Rachel M Freathy, Graham A. Hitman, Joanna Howson, Peter McGuffin, Michael Owen, John R. B. Perry, Helen Schuilenburg, Helen E Stevens, Deborah P.M. Symmons, Allan H Young, Tim Frayling, Gilean McVean, Stephen Sawcer, Andrew Tym Hattersley, Mark McCarthy, Peter Donnelly, Clare Turnbull, Michael Stratton, Wendy L McArdle, John A. Todd, Alexander J Mentzer, Patricia B Munroe, John Webster, Lars Feuk, Susan Ring, Derek P. Jewell, Wellcome Trust Case Control Consortium, David St Clair, Edward Flynn, Niall J Cardin, Jonathan Marchini, Peter S Braund, Kate Downes, Hazel E Drummond, Jayne Franklyn, Jennifer Jolley, Elaine R Nimmo, Abiodun Onipinla, Nigel William Rayner, Jeremy Sanderson, Sheila Seal, Beverley M Shields, Matt Simmonds, Paul Wordsworth, Paul Burton, Marcus Pembrey, Donald F Conrad, Matthew Hurles, Kathy Stirrups, Ifejinelo Onyiah, Millicent A Stone, Ann W Morgan, Anthony G Wilson, Katarzyna Błaszczyk, Nigel Carter, Jonathan Stephens, John F Thompson, David P Strachan, Nigel R Ovington, Jennifer Sambrook, Liz Forty, Meeta Maisuria-Armer, Andrew P Morris, Alison J Coffey, Elilan Somaskantharajah, Sue Shaw-Hawkins, David Pernet, Katarina Spanova, Stephen Geoffry Ball
November 2, 2010

Dissection of the genetics of Parkinson's disease identifies an additional association 5' of SNCA and multiple associated haplotypes at 17q21.

Robert Plomin, Panos Deloukas, Sarah Edkins, Cordelia Langford, Leena Peltonen-Palotie, David Burn, Christopher G. Mathew, Vincent Plagnol, Hannah Blackburn, Colin Freeman, Sarah E. Hunt, Huw R Morris, Elvira Bramon, Matti Pirinen, Aiden Corvin, Kailash Phatechand Bhatia, Richard C Trembath, Janusz A. Jankowski, Nicholas W. Wood, Roger A. Barker, Karen E Morrison, Carl E Clarke, Mark McCarthy, Andrew John Lees, Wellcome Trust Case Control Consortium 2, John Anthony Hardy, Coro Paisán-Ruíz, Peter Donnelly, Patrick F. Chinnery, Nick Craddock, Gavin Hudson
July 22, 2010

Fine-scale survey of X chromosome copy number variants and indels underlying intellectual disability

Vincent Plagnol, Jozef Gécz, Annabel Whibley, P. Andrew Futreal, Michael Stratton, Patrick S. Tarpey, Jackie Boyle, Andrea Licata, Raffaella Smith, Tod Fullston, Gillian Turner

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