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Progressive sequence alignment as a prerequisite to correct phylogenetic trees

Published in: Journal of Molecular Evolution

Date of publication: 1987

Language: English

Main subject: sequence alignment, phylogenetics

Bibliographic databases:

Cites articles 30

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An improved method of testing for evolutionary homology
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Construction of phylogenetic trees

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Further improvements in the method of testing for evolutionary homology among proteins
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A general method applicable to the search for similarities in the amino acid sequence of two proteins
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An iterative approach from the standpoint of the additive hypothesis to the dendrogram problem posed by molecular data sets
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The phylogeny of human globin genes investigated by the maximum parsimony method
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Bovine erythrocyte superoxide dismutase. Complete amino acid sequence
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The method of parsimony: an experimental test and theoretical analysis of the adequacy of molecular restoration studies
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Some sulfhydryl properties and primary structure of human erythrocyte superoxide dismutase
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Sequence homologies among E. coli ribosomal proteins: evidence for evolutionarily related groupings and internal duplications
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Evidence for a natural gene transfer from the ponyfish to its bioluminescent bacterial symbiont Photobacter leiognathi. The close relationship between bacteriocuprein and the copper-zinc superoxide dismutase of teleost fishes
October 1, 1981

Similar amino acid sequences: chance or common ancestry?
January 1, 1981

The current status of REH theory
July 1, 1981

A practical method for calculating evolutionary trees from sequence data
January 1, 1981

The old REH theory remains unsatisfactory and the new REH theory is problematical - a reply to Holmquist and Jukes,The old REH theory remains unsatisfactory and the new REH theory is problematical - a reply to holmquist and jukes
January 1, 1982

Accuracy of estimated phylogenetic trees from molecular data. I. Distantly related species
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A strategy for sequence phylogeny research
June 1, 1983

The primary structure of Cu-Zn superoxide dismutase from Photobacterium leiognathi: evidence for a separate evolution of Cu-Zn superoxide dismutase in bacteria
January 1, 1984

Evolution and the tertiary structure of proteins
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Aligning amino acid sequences: Comparison of commonly used methods
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The alignment of sets of sequences and the construction of phyletic trees: an integrated method
December 1, 1984

The amino-acid sequence of copper/zinc superoxide dismutase from swordfish liver. Comparison of copper/zinc superoxide dismutase sequences
May 1, 1985

Simultaneous comparison of three protein sequences
January 1, 1985

The presence of a copper/zinc superoxide dismutase in the bacterium Photobacterium leiognathi: a likely case of gene transfer from eukaryotes to prokaryotes
February 1, 1985

Superoxide dismutase: an evolutionary puzzle
January 1, 1986

A method for the simultaneous alignment of three or more amino acid sequences
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Estimating the reliability of evolutionary trees
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Primary sequence of a dimeric bacterial haemoglobin from Vitreoscilla
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Cloning of cDNA for maize superoxide dismutase 2 (SOD2).

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