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Empirical problems of the hierarchical likelihood ratio test for model selection

Author

Diego Pol

1974 -

Published in: Systematic Biology

Date of publication: December 1, 2004

Language: English

Bibliographic databases:

Cites articles 38

Date

Title

Authors

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Maximum Likelihood and Minimum-Steps Methods for Estimating Evolutionary Trees from Data on Discrete Characters
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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
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Evolutionary trees from DNA sequences: a maximum likelihood approach,Evolutionary trees from DNA sequences: A maximum likelihood approach
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Estimation of evolutionary distances between homologous nucleotide sequences
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Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
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Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
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The general stochastic model of nucleotide substitution
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Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods
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Estimation of evolutionary distances between nucleotide sequences
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Success of maximum likelihood phylogeny inference in the four-taxon case
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Inconsistency of evolutionary tree topology reconstruction methods when substitution rates vary across characters
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The effect of topology on estimates of among-site rate variation
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Evolution of the mitochondrial cytochrome oxidase II gene in collembola
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PHYLOGENY ESTIMATION AND HYPOTHESIS TESTING USING MAXIMUM LIKELIHOOD
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Molecular systematics of the Canidae
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The phylogenetic position of the musky rat-kangaroo and the evolution of bipedal hopping in kangaroos (Macropodidae: Diprotodontia).
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Phylogeny of frogs of the Physalaemus pustulosus species group, with an examination of data incongruence
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BEST-FIT MAXIMUM-LIKELIHOOD MODELS FOR PHYLOGENETIC INFERENCE: EMPIRICAL TESTS WITH KNOWN PHYLOGENIES.
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Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition
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Performance of likelihood ratio tests of evolutionary hypotheses under inadequate substitution models
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Appropriate likelihood ratio tests and marginal distributions for evolutionary tree models with constraints on parameters
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Parsimony, likelihood, and the role of models in molecular phylogenetics
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Phylogenetic relationships among the phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes
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