Joseph R. Nery

occupation: výzkumník

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Articles 13

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2017-08-01

Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex

Jun-Hao Li, Chongyuan Luo, Christopher L Keown, Laurie Kurihara, Jingtian Zhou, Yupeng He, Rosa Castanon, Jacinta Lucero, Joseph R. Nery, Brian Bui, Timothy T Harkins, Eran A. Mukamel, Margarita Behrens, Joseph R. Ecker, Terry Sejnowski
2018-09-20

Robust single-cell DNA methylome profiling with snmC-seq2

Rosa Castanon, Joseph R. Nery, António Pinto-Duarte, Carolyn O'Connor, Margarita Behrens, Joseph R. Ecker, Deborah Mash, Jacinta Lucero
2019-09-09

Simultaneous profiling of 3D genome structure and DNA methylation in single human cells

Joseph R. Nery, Jesse R Dixon, Joseph R. Ecker
2020-03-13

Integrated multi-omics framework of the plant response to jasmonic acid

Mathew G Lewsey, Lingling Yin, Elizabeth Hann, Joseph R. Nery, Ziv Bar-Joseph, Justin W. Walley, Roberto Solano, Joseph R. Ecker, Bruce Jow
2020-07-21

Publisher Correction: Integrated multi-omics framework of the plant response to jasmonic acid

Mathew G Lewsey, Lingling Yin, Elizabeth Hann, Joseph R. Nery, Ziv Bar-Joseph, Justin W. Walley, Roberto Solano, Joseph R. Ecker, Bruce Jow
2021-10-06

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Zizhen Yao, Seth A Ament, Margarita Behrens, Hector Roux de Bezieux, Tommaso Biancalani, A Sina Booeshaghi, Jonathan Crabtree, Megan Crow, Sandrine Dudoit, Michael Hawrylycz, Anup Mahurkar, Joseph R. Nery, Thuc Nghi Nguyen, António Pinto-Duarte, Sebastian Preissl, Elizabeth Purdom, Eeshit Dhaval Vaishnav, Cindy van Velthoven, Z. Josh Huang, Peter V Kharchenko, Aviv Regev, Bosiljka Tasic, Joshua D Welch, Evan Z Macosko, Bing Ren, Joseph R. Ecker, Hongkui Zeng, Eran A. Mukamel, Jacinta Lucero, Lior Pachter, Jesse Gillis
2021-10-06

DNA methylation atlas of the mouse brain at single-cell resolution

Jingtian Zhou, Joseph R. Nery, António Pinto-Duarte, Eran A. Mukamel, Edward M. Callaway, Bing Ren, Jesse R Dixon, Margarita Behrens, Joseph R. Ecker, Jacinta Lucero, Huaming Chen, Angeline C Rivkin, Sebastian Preissl, Carolyn O'Connor
2021-10-06

Comparative cellular analysis of motor cortex in human, marmoset and mouse

Trygve E. Bakken, Brian E Kalmbach, Megan Crow, Rebecca D Hodge, Fenna M Krienen, Zizhen Yao, Nikolai C Dembrow, Song-Lin Ding, Lucas T. Graybuck, Anup Mahurkar, Jeremy Miller, Marmar Moussa, Joseph R. Nery, Scott Owen, Seth A Ament, Margarita Behrens, Jerold Chun, T Hollt, Gregory Horwitz, Christopher Keene, Peter V Kharchenko, Boudewijn Lelieveldt, Eran A. Mukamel, António Pinto-Duarte, Sebastian Preissl, Aviv Regev, Bing Ren, Richard H. Scheuermann, Christof Koch, Michael Hawrylycz, Bosiljka Tasic, Evan Z Macosko, Steven A McCarroll, Hongkui Zeng, Kun Zhang, Guoping Feng, Joseph R. Ecker, Sten Linnarsson, Ed S Lein, Jacinta Lucero, Jesse Gillis, Staci Sorensen, Alexander Dobin, Herman Tung, Amy Torkelson, Matthew Kroll, Rachel Dalley, Christine Rimorin, Kirsten Crichton, Saroja Somasundaram, D. Bertagnolli, Jeff Goldy, Anna Marie Yanny, Kanan Lathia
2021-05-11

Single nucleus multi-omics regulatory landscape of the murine pituitary

Frederique Ruf-Zamojski, Gregory R Smith, Rosa Castanon, Joseph R. Nery, Gwen V Childs, Olga Troyanskaya, Joseph R. Ecker, Daniel J Bernard, Stuart C. Sealfon
2021-06-17

PHYTOCHROME-INTERACTING FACTORs trigger environmentally responsive chromatin dynamics in plants

Chan Yul Yoo, Shelly A Trigg, Yupeng He, Joseph R. Nery, Joseph R. Ecker, Joanne Chory
2021-10-06

Epigenomic diversity of cortical projection neurons in the mouse brain

Jingtian Zhou, Joseph R. Nery, António Pinto-Duarte, Jared B Smith, Xin Jin, Eran A. Mukamel, Margarita Behrens, Joseph R. Ecker, Edward M. Callaway
2022-03-15

Single nucleus multi-omics identifies human cortical cell regulatory genome diversity

Wayne I Doyle, Tim Stuart, Rebecca D Hodge, Bang-An Wang, Sebastian Preissl, Jingtian Zhou, Rosa Castanon, Angeline C Rivkin, Joseph R. Nery, David A Davis, Jesse R Dixon, Sten Linnarsson, Ed S Lein, Eran A. Mukamel, Joseph R. Ecker
2023-10-12

Single-cell DNA methylation and 3D genome architecture in the human brain

Wei Tian, Jingtian Zhou, Anna Bartlett, Hanqing Liu, Rosa Castanon, Mia Kenworthy, Jordan Altshul, Cynthia Valadon, Andrew Aldridge, Joseph R. Nery, Huaming Chen, Jiaying Xu, Nicholas D Johnson, Nora Emerson, Jon Rink, Jasper Lee, Yang Eric Li, Kimberly Siletti, Michelle Liem, Carolyn O'Connor, Julie Nyhus, N. Dee, Tamara Casper, Nadiya Shapovalova, Song-Lin Ding, Rebecca D Hodge, Boaz Levi, Christopher Keene, Sten Linnarsson, Ed S Lein, Bing Ren, Margarita Behrens, Joseph R. Ecker

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Joseph R. Nery

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