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Systematic identification and evolutionary analysis of catalytically versatile cytochrome p450 monooxygenase families enriched in model basidiomycete fungi

author

Khajamohiddin Syed

Jack Tuszyński

1956 -

published in: PLOS One

date of publication: 2014

language: English

Cites articles 54

Date

Title

Authors

2013-08-11

Phylogenetic and phylogenomic overview of the Polyporales

Robert Riley, Elisabet Sjökvist, Jeffrey P. Townsend, Igor V. Grigoriev, Alex Copeland, David Hibbett, Manfred Binder
2013-02-19

Microbial cytochromes P450: biodiversity and biotechnology. Where do cytochromes P450 come from, what do they do and what can they do for us?
2013-02-15

CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes
2013-01-06

A world of cytochrome P450s

David Robert Nelson
2013-08-08

Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora

Robert Riley
2012-06-01

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes

Robert Riley, Kerrie Barry, Bernard Henrissat, Angel T. Martínez, Ronald P de Vries, Patricia Ferreira, Paweł Górecki, Chiaki Hori, Kiyohiko Igarashi, Ursula Kües, Luis F Larrondo, Taina Lundell, Claude Murat, Antonis Rokas, Francisco J Ruiz-Dueñas, Franz J St John, Jan Stenlid, Daniel C. Eastwood, Igor V. Grigoriev, Alex Copeland, David Hibbett, Manfred Binder, Vincent Lombard, Antonio G Pisabarro, Francis Martin, Joseph W. Spatafora, Robert A Blanchette, Jill A Gaskell, Alan Kuo, Asaf Salamov, Kurt Labutti, Matthew J. Nolan, Annegret Kohler, Robin A. Ohm, Dimitrios Floudas, Dan Cullen, Jeremy Schmutz, Robert P Otillar, Jason C Slot, Cedar N Hesse, Jagjit Yadav, Alexis Carlson, Grzegorz Sabat, Masahiro Samejima, Khajamohiddin Syed, Aleksandrina Patyshakuliyeva, Susan Lucas, Andrea L. Aerts, Erika Lindquist
2012-11

P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium
2012-10-08

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

Claude Murat, Igor V. Grigoriev, Alla Lapidus, Jane Grimwood, Daniel C. Eastwood, Ursula Kües, Taina Lundell, Ronald P de Vries, Andy M Bailey, Kristiina Hildén, Gary D. Foster, Bernard Henrissat, Francis Martin, Emmanuelle Morin, Annegret Kohler, David Hibbett, Vincent Lombard, Jeremy Schmutz, Robin A. Ohm, Asaf Salamov, Dan Cullen, Christophe Billette, Aleksandrina Patyshakuliyeva, Susan Lucas, Andrea L. Aerts, Erika Lindquist
2012-10-04

Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes

Jaeyoung Choi, Jongsun Park, Seogchan Kang
2012-09-23

Evaluation of structural features in fungal cytochromes P450 predicted to rule catalytic diversification
2012-09-02

Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

Igor V. Grigoriev, Erika Lindquist, Alla Lapidus, Jacqueline MacDonald, Chiaki Hori, Kerrie Barry, Ronald P de Vries, Bernard Henrissat, Susan Lucas, Emma R Master, Asaf Salamov, Kurt Labutti, Jagjit Yadav, Masahiro Samejima, Khajamohiddin Syed, Andrea L. Aerts
2012-06-26

Genome sequence of the model medicinal mushroom Ganoderma lucidum

David Robert Nelson, Anthony Levasseur, Bernard Henrissat, Shilin Chen
2012-03-20

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

Luis F Larrondo, Monika Schmoll, Igor V. Grigoriev, Francisco J Ruiz-Dueñas, Patricia Ferreira, Paulo Canessa, Mario Tello, Kenneth E. Hammel, Franz J St John, José L. Lavín, Lucía Ramírez, Bernard Henrissat, Jon Magnuson, Ursula Kües, Chiaki Hori, Kiyohiko Igarashi, Kerrie Barry, Robert Riley, Ronald P de Vries, Jan Stenlid, Daniel C. Eastwood, Angel T. Martínez, David Hibbett, Emma R Master, Vincent Lombard, Masahiro Samejima, Benjamin W Held, Jill A Gaskell, Phil Kersten, Grzegorz Sabat, Sandra Splinter BonDurant, Khajamohiddin Syed, Jagjit Yadav, Randy M Berka, Robert A Blanchette, Amber Vanden Wymelenberg, Harshavardhan Doddapaneni, Venkataramanan Subramanian, Antonio G Pisabarro, José A Oguiza, Asaf Salamov, Dan Cullen, Rubén Polanco, Kurt Labutti, Dimitrios Floudas, Susan Lucas, Erika Lindquist
2011-07-14

The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi

Daniel C. Eastwood, Fred O. Asiegbu, Scott E. Baker, Kerrie Barry, Melanie Blumentritt, Ronald P de Vries, Bernard Henrissat, José L. Lavín, Claude Murat, Jongsun Park, Robert Riley, Inger Skrede, Jan Stenlid, Ursula Kües, Igor V. Grigoriev, David Hibbett, Manfred Binder, Katarina Ihrmark, Antonio G Pisabarro, Francis Martin, Asaf Salamov, Kurt Labutti, Annegret Kohler, Dimitrios Floudas, Dan Cullen, Allen C Gathman, Walt W Lilly, José A Oguiza, Jeremy Schmutz, Nils Högberg, Anna Rosling, Susan Lucas, Andrea L. Aerts, Erika Lindquist
2011-10

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura, Daniel Peterson, Nicholas Peterson, Glen Stecher, Masatoshi Nei, Sudhir Kumar
2011-12-02

A fungal P450 (CYP5136A3) capable of oxidizing polycyclic aromatic hydrocarbons and endocrine disrupting alkylphenols: role of Trp(129) and Leu(324).

Aleksey Porollo
2011-09-22

Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta

Hirofumi Ichinose
2011-05-06

Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species

Igor V. Grigoriev, Robert A Blanchette
2011-03-02

Cytochrome b₅ reductase-cytochrome b₅ as an active P450 redox enzyme system in Phanerochaete chrysosporium: atypical properties and in vivo evidence of electron transfer capability to CYP63A2

Thomas B. Thompson
2011-03-25

Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood
2011-12-20

Heterologous expression and mechanistic investigation of a fungal cytochrome P450 (CYP5150A2): involvement of alternative redox partners

Hirofumi Ichinose
2011-03-21

Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium: involvement of versatile monooxygenase

Hirofumi Ichinose
2010-07-30

Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs).
2010-07-07

Cytochrome P450 enzymes in the fungal kingdom
2010-05-28

Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium

Hirofumi Ichinose
2010-03-01

Metabolism of mono- and dichloro-dibenzo-p-dioxins by Phanerochaete chrysosporium cytochromes P450

Hirofumi Ichinose
2009-10-01

The cytochrome p450 homepage
2009-08-07

Changes in the gene expression of the white rot fungus Phanerochaete chrysosporium due to the addition of atropine
2009-04-17

Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression
2009-02-04

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

Monika Schmoll, Luis F Larrondo, Igor V. Grigoriev, Erika Lindquist, Martin Mokrejs, Paulo Canessa, Gary Xie, José L. Lavín, Jon Magnuson, Patricia Ferreira, Kenneth E. Hammel, Scott E. Baker, Ursula Kües, Bernard Henrissat, Jean F. Challacombe, Susan Lucas, David Hibbett, Harris Shapiro, Emma R Master, Jill A Gaskell, Phil Kersten, Grzegorz Sabat, Jagjit Yadav, Randy M Berka, Amber Vanden Wymelenberg, Harshavardhan Doddapaneni, Venkataramanan Subramanian, Antonio G Pisabarro, José A Oguiza, Asaf Salamov, Debbie Yaver, Dan Cullen, Monica Misra
2009-10-09

Atypical kinetics of cytochromes P450 catalysing 3'-hydroxylation of flavone from the white-rot fungus Phanerochaete chrysosporium
2008-10-10

Differential expression in Phanerochaete chrysosporium of membrane-associated proteins relevant to lignin degradation

Jon Magnuson, Kenneth E. Hammel

Article - wd:Q27329869

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