Inventaire - your friends and communities are your best library

Ten Simple Rules for Selecting a Bio-ontology

author

James Malone

Simon Jupp

Tom Hancocks

Helen Parkinson

Catherine Brooksbank

Robert David Stevens

1965 -

published in: PLOS Computational Biology

date of publication: 2016-02-11

language: English

main subject: ontology

Cites articles 16

Date

Title

Authors

2014

The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation

Duncan Hull, Allyson L Lister, James Malone, Helen Parkinson, Robert David Stevens, Jon C. Ison
2014-04-24

Ten simple rules for the care and feeding of scientific data

Alyssa A. Goodman, Kyle Cranmer, Yolanda Gil, Paul Groth, Margaret Hedstrom, David W. Hogg, Aneta Siemiginowska, Christine L. Borgman, Mercè Crosas, Alberto Pepe
2013-09

Scientific competency questions as the basis for semantically enriched open pharmacological space development

Christine Chichester, Antony John Williams, Lee Harland, Niklas Blomberg, Bryn Williams-Jones, Stefan Senger, Barbara Zdrazil, Steve Pettifer, Jordi Mestres, Manuel Pastor, Matthias Rarey
2012

Uberon, an integrative multi-species anatomy ontology

Christopher J. Mungall, Melissa Haendel, Georgios V. Gkoutos, Suzanna Lewis, Carlo Torniai
2012-04-25

Measuring the level of activity in community built bio-ontologies

James Malone, Robert David Stevens
2011-11-12

Disease Ontology: a backbone for disease semantic integration

Lynn Schriml, Warren Kibbe, Mark Mazaitis, Victor Felix
2010-06-22

Modeling biomedical experimental processes with OBI

Philippe Rocca-Serra, Susanna-Assunta Sansone, Larisa Soldatova, Alan Ruttenberg, Phillip Lord, James Malone, Melanie Courtot, Yongqun He, Helen Parkinson, Bjoern Peters, Christian J Stoeckert, Jeffrey Grethe, Ryan R Brinkman, Dirk Derom, Jennifer Fostel
2010-06-22

Building a biomedical ontology recommender web service

Mark A. Musen, Clement Jonquet, Nigam H. Shah
2010-07

The Ontology Lookup Service: bigger and better

Henning Hermjakob, Florian Reisinger, Lennart Martens, Juan Antonio Vizcaíno, Harald Barsnes, Rick H. Cote
2010-04-15

Modeling sample variables with an Experimental Factor Ontology

Alvis Brazma, Misha Kapushesky, Nikolay Kolesnikov, Tomasz Adamusiak, James Malone, Helen Parkinson
2009-01

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Richard A. Lempicki
2009-07

BioPortal: ontologies and integrated data resources at the click of a mouse

Mark A. Musen, Natalya Noy
2007-11

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

Barry Smith, Michael Ashburner, Philippe Rocca-Serra, Suzanna Lewis, Susanna-Assunta Sansone, Christopher J. Mungall, Karen Eilbeck, Alan Ruttenberg, Neocles Leontis, Werner Ceusters, Richard H. Scheuermann, Jonathan Bard, Amelia Ireland, Patricia L Whetzel, Nigam H. Shah, Jeffrey Louis Goldberg
2007-04-09

Phenotype ontologies: the bridge between genomics and evolution

Melissa Haendel, Michael Ashburner, Erik Segerdell, Paula M. Mabee, Georgios V. Gkoutos, Quentin C. B. Cronk, Christopher J. Mungall, Monte Westerfield
2005

An ontology for cell types

Michael Ashburner, Jonathan Bard, Sue Rhee
2000-05-01

Gene ontology: tool for the unification of biology. The Gene Ontology Consortium

Judith A. Blake, J. Michael Cherry, Midori A Harris, John C Matese, Gerald M. Rubin, Gavin Sherlock, David Botstein, Selina S Dwight

Article - wd:Q28600926

Welcome to Inventaire

the library of your friends and communities

learn more