Transcription factors in light and circadian clock signaling networks revealed by genomewide mapping of direct targets for neurospora white collar complex

published in:  Eukaryotic Cell
date of publication:  2010-10
language:  English
main subject:  circadian rhythmhypothetical proteinnipsnap family proteinhypothetical proteinmajor facilitator superfamily transporter MFS1hypothetical proteinnitrogen catabolic enzyme regulatory proteinhypothetical proteinmitochondrial GTPase-1HCO3hypothetical proteinVAD-2, variant 1VAD-2ER glycosyl hydrolaseABC transporter-10pH-response regulator protein palI/rim-9hypothetical proteinhypothetical proteinhypothetical protein, variant 1hypothetical proteinGDP/GTP exchange factor Sec2phypothetical proteinhypothetical proteinhypothetical proteinSeptal pore-associated protein, putativeSeptal pore-associated protein, putativehypothetical proteinSterol regulatory element binding protein sre-2, putativeSterol regulatory element binding protein sre-2, putativeSWIRM domain-containing protein FUN19hypothetical proteinhypothetical proteinhypothetical protein, variant 1hypothetical protein, variant 1hypothetical proteinbifunctional purine biosynthesis proteinArgininosuccinate synthaseargininosuccinate synthase, variant 126S proteasome non-ATPase regulatory subunit 12diacylglycerol acyltransferase-1conidial separation-1hypothetical proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteinprotein phosphatase-12protein phosphatase-12porin-binding domain protein-4porin-binding domain protein-4nuclear division-41MAP kinase kinase kinase SskBhypothetical proteinnucleotide-sugar transporterglycosyl hydrolasehypothetical proteinguanine triphosphate binding-18guanine triphosphate binding-18guanine triphosphate binding-18guanine triphosphate binding-18class I alpha-mannosidase 1APeroxisomal membrane proteinDUF1348 domain-containing proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinSeptal pore-associated protein, putativeheavy metal tolerance proteinhypothetical proteintranscription factor-24calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum typehypothetical proteinhypothetical proteinpyridoxal reductasehypothetical proteinSuccinate dehydrogenase flavoprotein subunithypothetical proteinhypothetical protein, variant 1hypothetical proteinMutS2 proteinalpha-mannosidasehypothetical proteinUPF0499 proteinmetacaspase-1Ahypothetical proteindevelopment and carotenogenesis control-1 proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteinhypothetical proteinG-protein coupled receptortriacylglycerol lipase, variant 1Triacylglycerol lipasehypothetical proteingliotoxin biosynthesis protein GliKhypothetical proteinhypothetical proteinhypothetical proteinefr-3NADH:ubiquinone oxidoreductase 9.5kD subunitrho guanyl nucleotide exchange factorvacuolar membrane ATPase 11RING-13 proteinlipoyltransferasephytoene synthasehypothetical proteincryptochrome DASHAspartate-semialdehyde dehydrogenasephytoene desaturaseglutathione transferase omega-1hypothetical proteinbetaine-6adenine-13hypothetical proteinhypothetical proteintranslocator proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinuroporphyrinogen decarboxylasehypothetical proteindeoxyuridine 5'-triphosphate nucleotidohydrolaseconidiation-specific protein-8flavin dinucleotide synthetase-1nuclear division-33nuclear division-33deoxyribodipyrimidine photolyaseribonucleoside-diphosphate reductase large subunitserine/threonine protein kinaseJmjC domain-containing histone demethylation protein 3Dvacuolar pH-sensitive ATPase 1hypothetical proteinhypothetical proteinhypothetical proteinStomatin family proteinhypothetical proteincondensing enzyme (mitochondrial)-2hypothetical proteinalkanesulfonate oxygenase-1hypothetical proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteinMFS transporterhypothetical proteinmetalloprotease-18acetate utilization-20activator 1 38 kDa subunitDUF1000 domain-containing proteinhypothetical proteinhypothetical proteinhypothetical proteinembden-meyerhof pathway-16embden-meyerhof pathway-16long-chain-fatty-acid-CoA ligase 1hypothetical proteinC2H2 transcription factorsugar transporter-5hypothetical proteinglyceraldehyde 3-phosphate-dehydrogenasehistone deacetylase HDA1calcineurin binding proteinhypothetical proteinrodlet proteinbli-4 proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinthiamine biosynthesis protein NMT-1aspartyl protease-14far upstream element-binding protein 2phosphatidylinositol glycan class Lhypothetical proteinzinc finger transcription factor-31hypothetical proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteinCell wall glucanasehypothetical proteindimethylaniline monooxygenase-1arrestin domain-containing proteinhypothetical proteinnon-anchored cell wall protein 3MYB DNA-binding domain-containing proteinpantotheic acid-3 proteinpantotheic acid-3 protein, variant 1DNA repair protein Rhp26/Rad26INSIG domain-containing proteinserine/threonine protein kinase-41pseudouridine-2alpha-actininVPS9 domain-containing proteinVPS9 domain-containing protein, variant 1hypothetical proteinF-box and WD repeat-containing proteinvacuolar protein sorting protein Vps18serine/threonine protein kinaseserine/threonine protein kinasevacuolar amino acid transporter 1hypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical protein, variant 1hypothetical proteincoronin-6SIR2 family histone deacetylasemitochondrial ribosomal protein subunit L31NADH-cytochrome b5 reductase-1flavoprotein oxygenase-1hypothetical proteinDNA polymerase gammaYEATS family proteinNAD-epimerase/dehydratase-3kinetochore protein-15hypothetical protein, variant 1hypothetical proteinprotein kinase CHM1hypothetical proteinhypothetical protein, variant 1DUF1183 domain-containing proteinhypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteincatalase-1Protein phosphatase 1 regulatory subunit 3A, putativeProtein phosphatase 1 regulatory subunit 3A, putativehypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinsecreted glucosidasehypothetical proteinlathosterol oxidasephenol monooxygenase-4hypothetical proteinribosomal L1 domain-containing protein 1hypothetical proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteinserine-10hypothetical proteinhypothetical proteinPQ loop repeat proteinalpha-ketoglutarate dependent xanthine dioxygenasenorsolorinic acid reductaseC6 finger domain-containing proteinC6 finger domain-containing protein, variant 1hypothetical proteinKu70/Ku80 family proteinintegral membrane channel proteinzinc transporter YKE4metallophosphoesterase domain-containing protein 2multisynthetase complex auxiliary component p43chromatin remodeling factor 5-1hypothetical proteinhypothetical proteinhypothetical proteinleucine aminopeptidase-112-oxophytodienoate reductase 1hypothetical proteincutinase transcription factor 1 alphahypothetical proteinphosphoribosylformylglycinamidine synthasemannose-1hypothetical proteinasparagine synthetase domain-containing protein 1sorbitol dehydrogenase-2mitogen-activated protein kinasebromodomain protein-1DNA-binding protein cre-1hypothetical proteinhypothetical proteinCut9 interacting protein Scn1Polycomb protein EEDcytochrome P450 61nonsense-mediated mRNA decay factorhypothetical proteinsulfite reductase beta subunithypothetical proteinhypothetical proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinABC multidrug transporterBYS1 domain-containing proteinhypothetical proteinhypothetical proteinhypothetical proteinMFS transporternon-classical export protein Nce102pantothenate transporter liz1mannosyl-oligosaccharide glucosidase, variant 1mannosyl-oligosaccharide glucosidaseoxidase assembly protein 2, variant 1oxidase assembly protein 2hypothetical proteinNAD kinase/ATP NAD kinasehypothetical protein, variant 1hypothetical proteinhypothetical protein, variant 2EBP domain-containing proteinclock controlled protein CCG-1glycosyl hydrolase family 47 proteinhypothetical proteinD-mandelate dehydrogenaseShort-chain dehydrogenasesubmerged protoperithecia-1, variant 1submerged protoperithecia-1zinc finger transcription factor-41hypothetical proteinhydrolaseUDP-N-acetylglucosaminyltransferasemitogen-activated protein kinase organizer 1mitochondrial outer membrane proteinmitochondrial outer membrane protein, variant 1lipid particle proteinhypothetical proteinperoxiredoxin HYR1hypothetical proteinhypothetical proteinaspartokinase-1C2H2 transcription factorprotein kinase gsk3, variant 1protein kinase gsk3neutral trehalasehypothetical proteinoxidoreductase domain-containing proteinaspartyl proteinaseaspartyl proteinase, variant 1aspartyl proteinase, variant 2hypothetical proteintranscription factor-7MSP domain-containing proteinhypothetical protein, variant 1hypothetical proteinhypothetical proteintwo-component system protein Ahypothetical proteinhypothetical proteinproteinase Tmannosyl-oligosaccharide alpha-1,2-mannosidasehypothetical proteinHLH transcription factorhypothetical proteinhypothetical proteinTATA-binding proteinhypothetical proteinhypothetical proteinsensor histidine kinase/response regulatorhypothetical proteinL-galactose dehydrogenasehypothetical proteinhypothetical proteinhypothetical proteinureidoglycolate hydrolase-1FMN-dependent 2-nitropropane dioxygenasevivid PAS protein VVDhypothetical proteincasein kinase 1b, variant 1casein kinase 1bAldehyde dehydrogenasealdehyde dehydrogenase, variant 1Ubiquitintranscription factor-10transcription factor-10hypothetical proteinhypothetical proteinzinc finger transcription factor-59hypothetical protein, variant 1hypothetical proteinhypothetical proteinmonooxygenasehypothetical proteinhypothetical proteinbilirubin oxidase-1hypothetical proteinhypothetical proteinhypothetical proteinhypothetical proteinhydroxymethylglutathione dehydrogenase-3HMG box-containing proteinhypothetical proteinhypothetical proteinhypothetical proteinphosphoketolase-2CP2 transcription factor, variant 1CP2 transcription factorwhite collar 1 protein, variant 2white collar 1 protein, variant 1white collar 1 proteinwhite collar 1 protein, variant 3period clock protein FRQperiod clock protein FRQ, variant 2period clock protein FRQ, variant 1prefoldin subunit 3, variant 1prefoldin subunit 3oxysterol-binding protein-4siderophore transport-8hypothetical protein, variant 2hypothetical protein, variant 1hypothetical proteinO-methyltransferasesugar transporter-28

Cites articles 47

Article - wd:Q28748987

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