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Molecular evolution of genes in avian genomes

author

Hans Ellegren

1962 -

Chris Ponting

Axel Künstner

Christopher N. Balakrishnan

Holger Schielzeth

Andreas Heger

David F. Clayton

published in: Genome Biology

date of publication: 2010

language: English

Cites articles 114

Date

Title

Authors

2010-04-01

The genome of a songbird

Hans Lehrach, Tim Birkhead, Lucinda Fulton, Paul Flicek, Elaine Mardis, Tina Graves, Evan E. Eichler, Doron Lancet, Tsviya Olender, Hans Ellegren, Chris Ponting, Constance Scharff, Erich Jarvis, Ya-Chi Lin, Axel Künstner, Albert J. Vilella, Julia George, Lesheng Kong, Susan Fairley, Jason T Howard, Iris Adam, Gloria Velasco, Christopher N. Balakrishnan, Jessica Stapley, William M McLaren, Andreas Heger, David F. Clayton, Xose S. Puente, David D. Pollock, Jon Slate, Scott V. Edwards, Terry Burke, David W Burt, Sarah E London, Shiaw-Pyng Yang, Simon White, Pat Minx, Jonathan V. Sweedler, Mark Batzer, Linnéa Smeds, Claudio V Mello, Arthur P. Arnold, Peter V Lovell, Osceola Whitney, Tarciso A F Velho, Andreas R Pfenning, Wesley C Warren, Richard K. Wilson, Miriam K Konkel, Carlos López Otín, Steve Searle, Jerilyn A Walker, Niclas Backström, Darren K Griffin, Preethi H Gunaratne, Marc Sultan, Ladeana Hillier, Asif T. Chinwalla, Robert Ekblom, Arian F. A. Smit, Robert Hubley, Joanne O. Nelson, Yun Li
2010-04

The recombination landscape of the zebra finch Taeniopygia guttata genome

Hans Ellegren, Holger Schielzeth, Matthew T Webster, Bart Kempenaers, Wolfgang Forstmeier
2010-01-06

Conservation of neutral substitution rate and substitutional asymmetries in mammalian genes

Hans Ellegren
2010-03-01

Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species

Scott V. Edwards, Erich Jarvis, Hans Ellegren, Osceola Whitney, Barney A. Schlinger, Wesley C Warren
2009-08-13

Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection

Hans Ellegren, Axel Künstner, Mattias Jakobsson
2009-09-01

Integrating genomes, brain and behavior in the study of songbirds

David F. Clayton, Christopher N. Balakrishnan, Sarah E London
2009-11

Quantitative prediction of molecular clock and ka/ks at short timescales

Joanna Masel
2009-06-18

Discrete molecular states in the brain accompany changing responses to a vocal signal
2009-05-05

Weak preservation of local neutral substitution rates across mammalian genomes

Hideo Imamura
2009-04-06

The rise and fall of a human recombination hot spot
2009-02-11

Primate home range and GRIN2A, a receptor gene involved in neuronal plasticity: implications for the evolution of spatial memory.

Rudolf Meier
2009-02-01

A selection model of molecular evolution incorporating the effective population size.

Hans Ellegren
2009-02-02

Quantification of adaptive evolution of genes expressed in avian brain and the population size effect on the efficacy of selection.

Hans Ellegren
2008-12-01

Nucleotide variation, linkage disequilibrium and founder-facilitated speciation in wild populations of the zebra finch (Taeniopygia guttata)

Christopher N. Balakrishnan, Scott V. Edwards
2008-10-20

Birdsong "transcriptomics": neurochemical specializations of the oscine song system

David F. Clayton, Claudio V Mello, Peter V Lovell
2008-11

Reduced purifying selection prevails over positive selection in human copy number variant evolution

Chris Ponting, Caleb Webber, Joris A Veltman, Rolph Pfundt
2008

Patterns of positive selection in six Mammalian genomes

Carlos D. Bustamante, Adam C. Siepel, Rute R. da Fonseca, Rasmus Nielsen
2008-06-27

A phylogenomic study of birds reveals their evolutionary history

Christopher C. Witt, Rauri C.K. Bowie, Rebecca Kimball, Edward L. Braun, David W. Steadman, Sushma Reddy
2008-05-02

A specialized forebrain circuit for vocal babbling in the juvenile songbird
2008-03-01

Social context-induced song variation affects female behavior and gene expression

Allison Jane Doupe
2008-05-13

Natural selection in avian protein-coding genes expressed in brain

Mikael Brandström, Hans Ellegren
2008-11-01

Comparative genomics and the study of evolution by natural selection

Hans Ellegren
2008-12-16

A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate

Hendrik-Jan Megens, Gane Ka-Shu Wong, Mark Lathrop, Hans H Cheng, Leif Andersson, Richard P. M. A. Crooijmans
2008-11-03

Toward resolving deep neoaves phylogeny: data, signal enhancement, and priors

Mary Morgan-Richards, Gillian C. Gibb, David Penny
2008-03-01

Genetic basis of fitness differences in natural populations

Ben C. Sheldon, Hans Ellegren
2008-01-16

No effect of recombination on the efficacy of natural selection in primates

Graham Coop
2008-08-24

A common sequence motif associated with recombination hot spots and genome instability in humans

Simon Myers, Peter Donnelly, Gilean McVean, Adam Auton
2008-02-04

Evolution of protein-coding genes in Drosophila.

Timothy B Sackton, David Sturgill, Amanda M Larracuente, Andrew G. Clark
2007-12

Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes

Chris Ponting, Andreas Heger
2007-09-20

Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes

Hans Ellegren, Birger Scholz
2007-08-24

Comment on Papers by Evans et al. and Mekel-Bobrov et al. on Evidence for Positive Selection of MCPH1 and ASPM
2007-08

PAML 4: phylogenetic analysis by maximum likelihood

Article - wd:Q28750176

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