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Whole genome profiling of spontaneous and chemically induced mutations in Toxoplasma gondii

author

Andrew Farrell

Bradley I Coleman

Marc-Jan Gubbels

published in: BMC Genomics

date of publication: 2014-05-10

language: English

main subject: Toxoplasma gondii

Cites articles 71

Date

Title

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2014-06-12

Forward genetic screening identifies a small molecule that blocks Toxoplasma gondii growth by inhibiting both host- and parasite-encoded kinases

Andrew Farrell, Patrick M Gaffney, Marc-Jan Gubbels
2014-03-05

MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping

Chip Stewart
2014-02-22

Malaria

Nicholas John White, Tran Tinh Hien, Arjen Dondorp, Sasithon Pukrittayakamee, Olugbenga A Mokuolu, Md. Abul Faiz
2013-05-18

Identification of mutations in TgMAPK1 of Toxoplasma gondii conferring resistance to 1NM-PP1

Kyousuke Kobayashi, Frances C Recuenco
2013-07-10

Genetic basis for phenotypic differences between different Toxoplasma gondii type I strains

Mariane B Melo, Marc-Jan Gubbels
2013-06-13

Web-based visual analysis for high-throughput genomics

Anton Nekrutenko, James Taylor, Jeremy Goecks, Carl Eberhard
2013-03-10

Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers

Uta Paszkowski, Caroline Gutjahr, Franziska Turck, George Coupland
2012

A forward genetic screen reveals that calcium-dependent protein kinase 3 regulates egress in Toxoplasma

Moritz Treeck, Matthew L Settles, John Boothroyd
2012-05-18

The HU protein is important for apicoplast genome maintenance and inheritance in Toxoplasma gondii
2012-04-04

Fast homozygosity mapping and identification of a zebrafish ENU-induced mutation by whole-genome sequencing

Carole Charlier, Wolfgang Driever, Wouter Coppieters
2012-02-08

A genetic screen to isolate Toxoplasma gondii host-cell egress mutants

Bradley I Coleman, Marc-Jan Gubbels
2012-01-01

A DOC2 protein identified by mutational profiling is essential for apicomplexan parasite exocytosis

David Ferguson, Brooke R Anderson-White, Marc-Jan Gubbels, Manoj Duraisingh, Jeffrey D Dvorin
2012-05-01

Evidence of non-random mutation rates suggests an evolutionary risk management strategy.
2012-05-22

Whole-Genome Profiling of a Novel Mutagenesis Technique Using Proofreading-Deficient DNA Polymerase δ.
2011-01-01

Mutagenesis as a tool in plant genetics, functional genomics, and breeding

Aakash Chawade, Mikael Larsson, Olof Olsson
2011-02-24

Base excision repair apurinic/apyrimidinic endonucleases in apicomplexan parasite Toxoplasma gondii

Millie M. Georgiadis
2010-09-19

Whole genome re-sequencing identifies a mutation in an ABC transporter (mdr2) in a Plasmodium chabaudi clone with altered susceptibility to antifolate drugs

Paul Hunt
2010-08

A new dominant peroxiredoxin allele identified by whole-genome re-sequencing of random mutagenized yeast causes oxidant-resistance and premature aging

Markus Ralser, Martin Kerick, Hans Lehrach, Michael Breitenbach, Johannes Grillari, Peter Laun, Katharina Bluemlein, Bernd Timmermann
2010-07-06

A strategy for direct mapping and identification of mutations by whole-genome sequencing
2010-05-03

Analysis of multiple ethyl methanesulfonate-mutagenized Caenorhabditis elegans strains by whole-genome sequencing

Vincent Bertrand, Oliver Hobert
2010-06

Whole-genome profiling of mutagenesis in Caenorhabditis elegans

Martin Hirst, Yaron Butterfield, Steven Jones, Donald G Moerman, Stephane Flibotte
2010-02-03

Whole-genome sequencing of a laboratory-evolved yeast strain

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2010-02-01

The impact of whole genome sequencing on model system genetics: get ready for the ride

Oliver Hobert
2010-03-21

Development of a screen to dissect Toxoplasma gondii egress

Marc-Jan Gubbels
2009-09-02

Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing

Stéphane Le Crom, Jon Magnuson, Len A. Pennacchio
2009-06-18

Circos: an information aesthetic for comparative genomics

Inanc Birol, Steven Jones, Randy D Gascoyne, Joseph M Connors, Marco Marra, Martin Krzywinski, Jacqueline E. Schein, Doug E Horsman
2009-02-13

Efficient gene replacements in Toxoplasma gondii strains deficient for nonhomologous end joining
2008-12-24

Comparing platforms for C. elegans mutant identification using high-throughput whole-genome sequencing

Oliver Hobert
2008-01-01

ENU mutagenesis, a way forward to understand gene function

Paul K Potter, Abraham Acevedo-Arozena, Roger Cox
2008-08-01

Caenorhabditis elegans mutant allele identification by whole-genome sequencing

Oliver Hobert
2008-02-01

Forward genetic analysis of the apicomplexan cell division cycle in Toxoplasma gondii

Marc-Jan Gubbels, Boris Striepen
2008-01-20

Whole-genome sequencing and variant discovery in C. elegans

Aaron R Quinlan, Paul Fox, Elaine Mardis, Tim Schedl, Jarret Glasscock

Article - wd:Q33669290

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