Inventaire - your friends and communities are your best library

Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines

author

Wen Huang

Aaron M. Tarone

Thomas Zichner

Kyle Chang

Carl E Hjelmen

Stephen Richards

Bart Deplancke

1975 -

Trudy Mackay

1952 -

David A. Mittelman

Gareth Highnam

Stephanie M Rollmann

Robert R H Anholt

Mary Anna Carbone

Donna Muzny

Richard A Gibbs

Lora Lewis

published in: Genome Research

date of publication: 2014-04-08

main subject: Drosophila melanogaster

Cites articles 85

Date

Title

Authors

2014-07-24

Intrapopulation genome size variation in D. melanogaster reflects life history variation and plasticity

Wen Huang, Aaron M. Tarone, Trudy Mackay
2014-01

Epistasis and quantitative traits: using model organisms to study gene-gene interactions

Trudy Mackay
2013-06-23

Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden

Martin Lysák, Ümit Seren, Alexander Platzer, Ashley Farlow, Fernando A Rabanal, Arthur Korte, Ines Hellmann
2013-04-25

Genome-wide association study of sleep in Drosophila melanogaster

Trudy Mackay
2013

Fine-scale signatures of molecular evolution reconcile models of indel-associated mutation

Asher D Cutter
2013-03-11

The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes

Gilean McVean, Gerton Lunter, Erika M Kvikstad, Konrad J. Karczewski, David L Goode, Laurent Duret, 1000 Genomes Project, Mark Bender Gerstein, Jonathan Marchini
2013-01-01

Strong mutational bias toward deletions in the Drosophila melanogaster genome is compensated by selection

Georgii A. Bazykin
2012

Population genomics of the Wolbachia endosymbiont in Drosophila melanogaster

Raquel S Linheiro, Mark F Richardson, Casey M Bergman, Francis M Jiggins
2012-12-20

Population genomics of inversion polymorphisms in Drosophila melanogaster
2012-12-31

Analysis of natural variation reveals neurogenetic networks for Drosophila olfactory behavior

Wen Huang, Trudy Mackay, Robert R H Anholt
2012-12-06

Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing

Thomas Zichner, Jan Korbel, Tobias Rausch, Eileen E. M. Furlong
2012-11-15

Genomic variation and its impact on gene expression in Drosophila melanogaster

Sebastian M Waszak, Korneel Hens, Bart Deplancke, Jeffrey D. Jensen, Trudy Mackay, Julien F Ayroles
2012-11-03

FlyBase: improvements to the bibliography

Ruth L Seal, Steven J Marygold
2012-10-11

The many landscapes of recombination in Drosophila melanogaster

Ramesh Ratnappan
2012-09-15

DELLY: structural variant discovery by integrated paired-end and split-read analysis

Thomas Zichner, Jan Korbel, Tobias Rausch, Vladimir Benes
2012-09-04

Epistasis dominates the genetic architecture of Drosophila quantitative traits

Donna Muzny, Wen Huang, Trudy Mackay, Robert R H Anholt, Mary Anna Carbone, Julien F Ayroles
2012-08-30

A second-generation assembly of the Drosophila simulans genome provides new insights into patterns of lineage-specific divergence

Michael B. Eisen, Peter Andolfatto, Kevin R Thornton
2012-08-02

Optimal unified approach for rare-variant association testing with application to small-sample case-control whole-exome sequencing studies

Xihong Lin, David C. Christiani, Deborah A Nickerson
2012-04-01

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

Adrian E Platts
2012-06-08

Genome-wide association for sensitivity to chronic oxidative stress in Drosophila melanogaster

Trudy Mackay, Robert R H Anholt
2012-05-03

Using whole-genome sequence data to predict quantitative trait phenotypes in Drosophila melanogaster

Martin Schlather, Trudy Mackay, Julien F Ayroles
2012-04-04

Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster

Trudy Mackay, Robert R H Anholt
2012-02-23

Joint genotyping on the fly: identifying variation among a sequenced panel of inbred lines
2012-02-16

A strong deletion bias in nonallelic gene conversion
2012-02-08

The Drosophila melanogaster Genetic Reference Panel

Raquel S Linheiro, Mark F Richardson, David Castellano, Sònia Casillas, Casey M Bergman, Julio Rozas, Kevin R Thornton, Julie M Cridland, Trudy Mackay, David A. Mittelman, Stephanie M Rollmann, Robert R H Anholt, Mary Anna Carbone, Julien F Ayroles, Lynne Nazareth, Richard A Gibbs, Shalini Jhangiani, Kim C Worley
2011-11-29

FlyBase 101--the basics of navigating FlyBase

Peter McQuilton
2011-10-04

Variation in the mutation rate across mammalian genomes

Adam Eyre-Walker, Alan Hodgkinson
2011-09-30

Challenges in studying genomic structural variant formation mechanisms: the short-read dilemma and beyond

Jan Korbel, Megumi Onishi-Seebacher
2011-08-28

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

Paul J. Kersey, Xiangchao Gan, Christopher Toomajian, Eric Kemen, Oliver Stegle, Gunnar Rätsch
2011-07-07

Rare-variant association testing for sequencing data with the sequence kernel association test

Michael C Wu, Michael Boehnke, Xihong Lin, Tianxi Cai
2011-06-14

Clusters of nucleotide substitutions and insertion/deletion mutations are associated with repeat sequences

Jun-yi Leu
2011-04-28

Chromatin: constructing the big picture

Bas van Steensel

Article - wd:Q33839446

Welcome to Inventaire

the library of your friends and communities

learn more