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The role of nucleosome positioning in the evolution of gene regulation

author

Aviv Regev

Oliver J Rando

published in: PLOS Biology

date of publication: 2010-07-06

language: English

Cites articles 78

Date

Title

Authors

2010-03-09

Evolutionary tinkering with conserved components of a transcriptional regulatory network

Adnane Sellam, Malcolm Whiteway
2010-03-08

Gene duplication and the evolution of ribosomal protein gene regulation in yeast

Aviv Regev
2010-01-31

Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae

Tobias Straub, Karl Ekwall
2009-12-22

G+C content dominates intrinsic nucleosome occupancy
2009-12-01

Fungal regulatory evolution: cis and trans in the balance

Aviv Regev
2009-10-29

From elements to modules: regulatory evolution in Ascomycota fungi

Aviv Regev
2009-10-21

High-resolution nucleosome mapping reveals transcription-dependent promoter packaging
2009-09-01

Defining mechanisms that regulate RNA polymerase II transcription in vivo
2009-07-20

Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo

Yong Zhang, Barbara P Rattner
2009-07-10

What controls nucleosome positions?

Eran Segal
2009-06-13

Nucleosome positioning: how is it established, and why does it matter?

Marta Radman-Livaja, Oliver J Rando
2009-05-01

Mechanisms that specify promoter nucleosome location and identity
2009

The biology of chromatin remodeling complexes
2009-01-01

Genome-wide views of chromatin structure

Oliver J Rando
2009-03-01

Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization

Noam Kaplan, Eran Segal, Piotr A Mieczkowski, Yaniv Lubling, Jason D Lieb
2009-03-01

Nucleosome positioning and gene regulation: advances through genomics
2009-01-25

Bidirectional promoters generate pervasive transcription in yeast

Julien Gagneur, Sandra Clauder-Münster, Wolfgang Huber, Lars M Steinmetz, Elisa Guffanti, Françoise Stutz
2009-04

High-resolution DNA-binding specificity analysis of yeast transcription factors

Federico De Masi, Rachel Patton McCord, Martha L Bulyk
2009-01-05

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome
2009-05-01

A yeast hybrid provides insight into the evolution of gene expression regulation.

Itay Tirosh, Naama Barkai, Sharon Reikhav
2009-03-01

Intrinsic variability of gene expression encoded in nucleosome positioning sequences.
2008-12-26

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

Marinella Gebbia, Corey Nislow, Harm van Bakel, Esther T Chan, Andrea J Gossett, Jason D Lieb
2008-12-11

Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites

Masahiro Kasahara, Sumio Sugano, Yutaka Suzuki, Shinichi Morishita, Kōji Matsushima, Yuji Kohara, Budrul Ahsan, Yoichiro Nakatani, Masako Ogawa, Taro Saito, Atsuko Shimada
2008-11-07

The impact of the nucleosome code on protein-coding sequence evolution in yeast

Laurence D. Hurst, Nizar N Batada, Tobias Warnecke
2008-11-07

Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

Eran Segal, Eilon Sharon, Noam Kaplan, Yaniv Lubling
2008-06-26

Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

Andrew Routh, Sara Sandin
2008-06-12

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
2008-04-30

Two strategies for gene regulation by promoter nucleosomes

Itay Tirosh, Naama Barkai
2008-04-16

Chromatin decouples promoter threshold from dynamic range
2008-04-13

Nucleosome organization in the Drosophila genome

Istvan Albert
2008-03-28

The asexual yeast Candida glabrata maintains distinct a and alpha haploid mating types

Cécile Fairhead, Hennequin Christophe
2008-03-18

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

Martin Hirst, Steven Jones

Article - wd:Q33964627

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