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Global Biodiversity of Aquatic Ammonia-Oxidizing Archaea is Partitioned by Habitat

published in: Frontiers in Microbiology

date of publication: 2012-07-18

main subject: habitat, biodiversity, Archaea

Cites articles 53

Date

Title

Authors

2012-05-30

Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats.

Annika C. Mosier, Marie B Lund, Christopher A Francis
2011-12-08

Niche specialization of terrestrial archaeal ammonia oxidizers

James I. Prosser, Cécile Gubry-Rangin, Robert Griffiths, Christopher Quince, Michael Schloter, Brigitte Schloter-Hai
2011-12-05

amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions

Barbara Reinhold-Hurek, Michael Pester, Alexander Loy, Andreas Richter, Thomas Rattei, Michael Wagner, Jörg Overmann
2011-10-14

Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I.1a from an agricultural soil

Jaap Sinninghe Damsté, W. Irene C. Rijpstra
2011-09-19

Thaumarchaeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers

Holger Daims, Ian M. Head, Andreas Richter, Michael Wagner, Per Halkjær Nielsen, Jeppe L. Nielsen, Jaap Sinninghe Damsté
2011-09-06

Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil

James I. Prosser, Laura E Lehtovirta-Morley, Kilian Stoecker, Andreas Vilcinskas
2011-08-26

Niche partitioning of marine group I Crenarchaeota in the euphotic and upper mesopelagic zones of the East China Sea.

Nianzhi Jiao
2011-05-01

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

Rob Knight, Guy R. Cochrane, Philippe Rocca-Serra, Manimozhiyan Arumugam, Peer Bork, Nikos C. Kyrpides, Jacques Ravel, Jennifer R Wortman, Erica Sodergren, Philip Hugenholtz, Ilene Karsch-Mizrachi, Eamonn Maguire, Lindsay K Newbold, Elmar Pruesse, Brian D Muegge, Robert Vaughan, Vivien R. Bonazzi, Andrew L Kau, Pier Luigi Buttigieg, Pelin Yilmaz, Christopher I. Hunter, Lynn Schriml, Omry Koren, Peter Sterk, Patrick D. Schloss, Peter Dawyndt, Folker Meyer, Janet K Jansson, Frederic D. Bushman, Jeroen Raes, David Relman, George Weinstock, Ruth Ley, James M. Tiedje, Dirk Gevers, Robert Guralnick, Martin J. Blaser, Catherine A. Lozupone, Norman R. Pace, Jeffrey I. Gordon, Diana R. Nemergut, Christian Quast, Frank Oliver Glöckner, Renzo Kottmann, Linda Amaral-Zettler, Noah Fierer, Norman Morrison, Mark J. Bailey, Andy Whiteley, Antonio Gonzalez, Justin Kuczynski, Jesse Stombaugh, Dan Knights, Jack A Gilbert, Jed A. Fuhrman, Sarah K Highlander, Scott T Kelley, Joseph Petrosino, Josh D Neufeld, Patrick S Chain, Owen White, Bruce Birren, Lita Proctor, Inigo San Gil, Heather Huot-Creasy, Doyle V Ward, Rachel Gallery, Anjanette Johnston, Joonhong Park, Laura Baumgartner, Kerry Elizabeth Costello, Todd Z. DeSantis, Wolfgang Hankeln, Robert Larsen, Teresa Legg, Donna Lyons, Barbara A Methé, Sara Nakielny, Giriprakash Palanisamy, Jörg Peplies, Sujeevan Ratnasingham, Doug Wendel, Tanya Yatsunenko, Karen E. Nelson, Richard A Gibbs
2011-05-17

Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

Maria Tourna, Anja Spang, Martin Koenneke, Tim Urich, Andreas Richter, Michael Wagner, Michael Schloter, Arno Schintlmeister, Christa Schleper
2011

Genome of a low-salinity ammonia-oxidizing archaeon determined by single-cell and metagenomic analysis

Annika C. Mosier, Paul Blainey, Christopher A Francis, Stephen Quake
2011-01-01

Determining the distribution of marine and coastal ammonia-oxidizing archaea and bacteria using a quantitative approach

Annika C. Mosier, Christopher A Francis
2010-11-05

Spatial variability in nitrification rates and ammonia-oxidizing microbial communities in the agriculturally impacted Elkhorn Slough estuary, California

Annika C. Mosier, Christopher A Francis, Adina Paytan
2010-09-20

Autotrophic ammonia oxidation by soil thaumarchaea

James I. Prosser, Limei Zhang, Ji-Zheng He
2010-03-23

Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current

Alyson E Santoro, Christopher A Francis
2010-02-18

Population ecology of nitrifying archaea and bacteria in the Southern California Bight.

Jed A. Fuhrman
2009-11-25

Abundances of crenarchaeal amoA genes and transcripts in the Pacific Ocean

David M. Karl, Matthew J. Church, Edward F. DeLong
2009-10-02

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

Gerhard G Thallinger, Patrick D. Schloss, Martin Hartmann, Donovan H Parks, Blaz Stres
2009-10-02

Distribution and diversity of archaeal and bacterial ammonia oxidizers in salt marsh sediments

Anne E Bernhard
2009-08-27

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

Rob Knight, Catherine A. Lozupone
2009-04-21

Environmental factors shaping the ecological niches of ammonia-oxidizing archaea

Nico Boon, Willy Verstraete, Massimo Marzorati, Lieven Wittebolle, Tuba H Erguder
2009-03-02

Revising the nitrogen cycle in the Peruvian oxygen minimum zone

Phyllis Lam, Dagmar Woebken, Jack van de Vossenberg, Marlene M. Jensen, Gaute Lavik, Mike Jetten, Rudolf Amann, Marcel M M Kuypers
2009-07-06

Ammonia-oxidizing Archaea in the Arctic Ocean and Antarctic coastal waters.
2009-06-04

Ammonia-oxidizing communities in a highly aerated full-scale activated sludge bioreactor: betaproteobacterial dynamics and low relative abundance of Crenarchaea

George F. Wells, Craig Criddle
2009-02-19

Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil.

Ralf Conrad
2008-12

The population genetics of dN/dS

Joshua B. Plotkin
2008-11-26

Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic.

Hélène Agogué, Gerhard J. Herndl
2008-11-01

Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary

Annika C. Mosier, Christopher A Francis
2008-03-01

Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

Bastien Boussau, Simonetta Gribaldo
2008-02-04

A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring

Holger Daims, Andreas Richter, Michael Wagner, Kilian Stoecker, Eva Spieck
2008-01-19

Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol

Martin Koenneke
2008-01-11

Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile

Christopher A Francis, Scott Fendorf
2008-05-01

Resource partitioning and sympatric differentiation among closely related bacterioplankton.

Lawrence A David, Dana E. Hunt, Dirk Gevers, Martin F. Polz, Eric J Alm

Article - wd:Q34349281

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