Inventaire - dine venner og fællesskaber er dit bedste bibliotek

The bacterial response regulator ArcA uses a diverse binding site architecture to regulate carbon oxidation globally

udgivet i: PLOS Genetics

dato for udgivelse: 2013-10-17

Cites articles 112

Date

Titel

Forfattere

2013-06-20

Genome-scale analysis of escherichia coli FNR reveals complex features of transcription factor binding

Kevin Myers, Dongjun Chung
2013-01-08

Crystal structure of the O(2)-tolerant membrane-bound hydrogenase 1 from Escherichia coli in complex with its cognate cytochrome b

Anne Volbeda, Alison Parkin, Frank Sargent
2012-12-19

ChIP-seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization

Mark R. Davies, Thomas Wileman, Jay C. D. Hinton, Robert A Kingsley, Gordon Dougan
2012-10-05

Genome-wide PhoB binding and gene expression profiles reveal the hierarchical gene regulatory network of phosphate starvation in Escherichia coli

Whi Fin Wu
2012-10-12

ArcA and AppY antagonize IscR repression of hydrogenase-1 expression under anaerobic conditions, revealing a novel mode of O2 regulation of gene expression in Escherichia coli

Patricia J Kiley
2012-10-12

Manipulation of the anoxic metabolism in Escherichia coli by ArcB deletion variants in the ArcBA two-component system

Gonzalo N Bidart, Pablo I Nikel
2012-08-09

Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profiling

Bernhard Palsson
2012-07-01

Systems analysis of transcription factor activities in environments with stable and dynamic oxygen concentrations
2012-03-24

Redox balance is key to explaining full vs. partial switching to low-yield metabolism

Roeland M H Merks
2012-03-02

Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen

Jennifer L. Reed, Leonardo da Costa Sousa, Mingjie Jin, James J Ellinger, Patricia J Kiley
2011-01-01

Mapping E. coli RNA polymerase and associated transcription factors and identifying promoters genome-wide

Robert Landick
2011-03-21

Analysis of the ArcA regulon in anaerobically grown Salmonella enterica sv. Typhimurium

Ryan C. Fink, Michael McClelland, Hosni M Hassan
2011-01-20

Transcript profiling and inference of Escherichia coli K-12 ArcA activity across the range of physiologically relevant oxygen concentrations
2011-01

EcoCyc: a comprehensive database of Escherichia coli biology

Martin Peralta-Gil, Julio Collado-Vides, Peter D. Karp, Ian T. Paulsen, Alberto Santos-Zavaleta, Markus Krummenacker, Socorro Gama-Castro
2010-12-29

Lipoic acid: energy metabolism and redox regulation of transcription and cell signaling
2010-09-15

Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA

Pierre Mandin, Susan Gottesman
2010-06-17

The key role of the redox status in regulation of metabolism in photosynthesizing organisms

Ireneusz Ślesak, Zbigniew Miszalski, Andrzej Kornaś
2010-04-21

MochiView: versatile software for genome browsing and DNA motif analysis
2010-03-18

Metabolic and transcriptional response to cofactor perturbations in Escherichia coli

Andreas Schmid, Marco Oldiges, Christian Solem, Peter Ruhdal Jensen, Lars Mathias Blank
2010-01-14

Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli

Anders Boysen, Jakob Møller-Jensen, Birgitte H Kallipolitis, Martin Overgaard
2010-03

Reprogramming of anaerobic metabolism by the FnrS small RNA

Gisela Storz
2010-03-01

In vitro and in vivo analysis of the ArcB/A redox signaling pathway.
2009-12-22

A blind deconvolution approach to high-resolution mapping of transcription factor binding sites from ChIP-seq data

James Galagan
2009-11-20

The ArcBA two-component system of Escherichia coli is regulated by the redox state of both the ubiquinone and the menaquinone pool

Klaas Hellingwerf, Martijn Bekker, Wouter Laan, Joost Teixeira de Mattos
2009-10

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA

Jörg Vogel, Kai Papenfort
2009-08-23

Visualizing post genomics data-sets on customized pathway maps by ProMeTra-aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example

Alexander Goesmann, Jörn Kalinowski
2009-01-01

Biological insights from structures of two-component proteins

Ann M Stock
2009-08-01

SOAP2: an improved ultrafast tool for short read alignment

Karsten Kristiansen, Tak-Wah Lam, Jun Wang, Ruiqiang Li
2009-01-31

Sequence-specific binding to a subset of IscR-regulated promoters does not require IscR Fe-S cluster ligation
2008-09

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

Richard M. Myers, Serafim Batzoglou
2008-08-13

Organization and evolution of the biological response to singlet oxygen stress
2008-07-24

A high-throughput percentage-of-binding strategy to measure binding energies in DNA-protein interactions: application to genome-scale site discovery

Haichun Gao, George Weinstock, Jizhong Zhou

Artikel - wd:Q35022310

Welcome to Inventaire

dit venne- og fællesskabs bibliotek

vil du vide mere