Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism

utgivningsår:  2004-03-01
huvudämne:  exo-beta-1,3-glucanaseDNA mismatch repair protein MSH3DNA excision repair protein Rad2SET-7alpha-1,6-mannosyltransferase subunitprotein arginine N-methyltransferase 1crossover junction endonuclease mus-81krev-1C6 transcription factor, putativeVAD-2, variant 1VAD-2hypothetical proteineukaryotic translation initiation factor 4EendothiapepsinREV1CBF/NF-Y family transcription factorsulfate adenylyltransferasetranslation factor SUI1SET-8mating-type protein A-3REV3sister chromatid cohesion protein Eso1SET-3proteasome component C1Hexokinasehexokinase, variant 1histone acetyl transferase-2zinc finger transcription factor-39zinc finger transcription factor-39Alpha-glucosidasealpha-glucosidase, variant 126S proteasome non-ATPase regulatory subunit 12PWWP domain-containing proteinzinc finger transcription factor-47zinc finger transcription factor-47hypothetical proteinMUTL-2proteasome component C5hypothetical protein, variant 2hypothetical protein, variant 1hypothetical proteinragged-1zinc finger transcription factor-43Alpha-amylasedynamin-1zinc finger transcription factor-20proteasome component PRE2SIR2 family histone deacetylasechromodomain helicasechromodomain helicase, variant 1hypothetical protein, variant 1hypothetical proteinhypothetical proteinhypothetical proteinhypothetical protein, variant 1hypothetical protein, variant 1hypothetical proteinAspartic-type endopeptidaseG2-specific protein kinase nimAcalcium-transporting ATPase type 2C member 1triacylglycerol lipase FGL2proteasome component PUP3calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum typeglucosyltransferaseall development altered-4clockswitch protein CSW-1hypothetical protein, variant 1hypothetical proteinchromatin assembly factor 1 proteinserine/threonine protein kinase, variant 1serine/threonine protein kinaseADP-ribosylation factor 1ADP-ribosylation factor 1, variant 1nuclease-9vacuolar membrane PQ loop repeat proteinnitrate assimilation regulatory protein nirAMutS2 proteintranscriptional regulatory protein pro-1eukaryotic translation initiation factor 3hypothetical proteinproteasome 26S subunit20S proteasome subunitendothiapepsinfungal specific transcription factorRAB GTPase Ypt5glycosylhydrolase family 61-7 proteinhistone deacetylase RPD326S proteasome regulatory subunit rpn11zinc finger transcription factor-48G-protein coupled receptorendoglucanase 3chromodomain protein-2chromodomain protein-2, variant 1Beta-xylosidaseN,O-diacetylmuramidasehypothetical proteinBeta-galactosidaseRING-13 proteinphosphatidyl inositol 3-kinaseNAD-dependent deacetylase sirtuin-226S proteasome regulatory subunit S5Aaspartic proteinasehypothetical proteinADA-3endo-1,4-beta-xylanase A26S protease regulatory subunit 7eukaryotic translation initiation factor 2 gamma subunithistone deacetylase phd1hypothetical proteintranscription factor-27transcription factor-27proliferating cell nuclear antigenRecQ family helicaseproteasome subunit beta type 7hypothetical proteinmannosyltransferaseShort aerial hyphae defective 4Short aerial hyphae defective 4hypothetical proteinhypothetical proteinAldehyde dehydrogenasehypothetical proteinsteroid-4histone H2A.Zhistone H2A.Z, variant 1histone H2A.Z, variant 226S protease regulatory subunit 8fungal specific transcription factorfungal specific transcription factoralpha-1,2-mannosyltransferase alg11dicer-like protein 220S proteasome subunit Y7DNA polymerase TauTwo-component histidine kinase CHK-1Two-component histidine kinase CHK-1DNA repair protein rhp57protein arginine methyltransferase RmtBC2H2 transcription factorHistone H3Histone H4hypothetical proteinDNA repair helicase RAD3Protein arginine N-methyltransferase HSL7protein arginine N-methyltransferase HSL7, variant 126S proteasome non-ATPase regulatory subunit 11heat shock protein 6026S proteasome regulatory subunit rpn-8glyceraldehyde 3-phosphate-dehydrogenasehistone deacetylase HDA1guanine triphosphate binding-11chromodomain protein-3Glucoamylasechromosome segregation proteinsmall GTP-binding proteinC6 zinc finger regulator fluffymus-23DNA repair protein RAD14bromodomain protein-3, variant 1bromodomain protein-3RNA-dependent RNA polymerasehypothetical proteinhypothetical proteinSET-6DNA repair protein rad-5hypothetical proteineukaryotic translation initiation factor 3DNA repair protein Rhp26/Rad26hypothetical proteinhypothetical protein, variant 1zinc finger transcription factor 1guanine triphosphate binding-13VAD-4proteasome component PRE6, variant 1proteasome component PRE6histone acetyltransferase type B catalytic subunitSNF2-family ATP dependent chromatin remodeling factor snf21heterotrimeric G proteinATRXhistone-lysine N-methyltransferaseeukaryotic translation initiation factor 3hypothetical proteineukaryotic translation initiation factor 3 110 kDa subunitguanine nucleotide-binding protein subunit gammaserine/threonine-protein phosphatase PP1pH-response transcription factor pacC/RIM101serine/threonine-protein kinasepheromone receptor pre-1Histone H3dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferaseDDT domain-containing proteinSIR2 family histone deacetylaseHistone H4hypothetical proteinglycosyl hydrolase family 16-15histone-lysine N-methyltransferasemutagen sensitive-21 proteinhypothetical proteinhypothetical protein, variant 1TAH-1, variant 1TAH-1PQ loop repeat proteinVAD-1aspartic proteinaseeukaryotic translation initiation factor 5Ras superfamily GTPaseeukaryotic release factor 1guanine nucleotide-binding protein beta subunitalternative NADH-dehydrogenaseADP-ribosylation factor 1eukaryotic translation initiation factor 6hypothetical proteinTBP associated factor, variant 1TBP associated factorTriosephosphate isomeraseSAH-3secreted aspartic proteinase1,3-beta glucanaseEndo-1,4-beta-xylanaseendoglucanase IIUVS-3acetyltransferasetranscriptional regulatorhypothetical proteinendoglucanase EG-1Hst3pAll development-altered regulator ADA-6alternative oxidasefungal specific transcription factorfungal specific transcription factor, variant 1eukaryotic translation initiation factor 3 subunit 3elongation factor 3Phosphoglycerate kinasedolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferaseMUS26ADA-726S proteasome regulatory subunit Rpn1translation elongation factor aEF-2purine utilization positive regulatorDNA mismatch repair protein MutLDNA mismatch repair protein mutL, variant 1nitrogen assimilation transcription factor nit-4eukaryotic translation initiation factor 2 alpha subunitguanine triphosphate binding-10profilin, variant 1Profilindolichyl-phosphate beta-glucosyltransferaseDNA topoisomerase 2, variant 1G-protein-coupled receptor 4 proteinchromatin remodeling factor 5-1Chitinasemannosyl transferaseregulatory particle, ATPase-like-5 proteinhistone-lysine N-methyltransferasefungal specific transcription factor, variant 2fungal specific transcription factor, variant 1fungal specific transcription factorSET-4neuronal calcium sensor 1UDP-N-acetyl-glucosamine-1-P transferase Alg7hypothetical protein, variant 1hypothetical proteinchitin synthase 6translation initiation factor eIF-2B alpha subunithistone h4-2cutinase transcription factor 1 alphaDNA mismatch repair proteineukaryotic translation initiation factor 3Hsp70-like proteinzinc finger transcription factor-50hypothetical proteinzinc binuclear cluster-type proteinAcid phosphataseexoglucanase 1alpha-1,2 glucosyltransferase alg-10glucose-6-phosphate isomerasebeta-1,4-mannosyltransferaseExopolygalacturonasetranscriptional activator xlnRsubmerged protoperithecia-2histone deacetylase HosBglycogen phosphorylase-1bromodomain protein-1DNA-binding protein cre-1proteasome component PUP2zinc finger transcription factor-40mitochondrial translation initiation factor IF-2sulfite reductase beta subunithistone acetyltransferase esa-1G-protein alpha subunitpolymerase 2 ADP-ribosyltransferase 2hypothetical proteinFructose-bisphosphate aldolasefructose-bisphosphate aldolase, variant 1fungal specific transcription factorendoglucanase IVhypothetical proteinSNF2 family helicase/ATPaseSNF2 family helicase/ATPase, variant 1hypothetical proteinhypothetical proteinexoglucanase 2Alpha-glucosidaseeukaryotic translation initiation factor 2 beta subunit, variant 1eukaryotic translation initiation factor 2 beta subunithypothetical proteinG-protein coupled receptorBeta-galactosidasehypothetical proteinosmolarity two-component system protein sln1protein kinase SNF1melanization defective-1homeobox domain-containing proteinlipaselipase, variant 1Beta-glucosidase 2beta-glucosidase 2, variant 1fatty acid regulation-2DNA repair protein RAD16Snf2 helicase-1oxidase assembly protein 2, variant 1oxidase assembly protein 2zinc finger transcription factor-13guanine triphosphate binding-14nucleosome assembly factor-2trimethyllysine dioxygenaseelongation factor 1-gammaeukaryotic translation initiation factor 3 subunit EifCfRibonuclease T1ribonuclease T1, variant 1hypothetical proteinhypothetical proteinhypothetical protein, variant 1submerged protoperithecia-1, variant 1submerged protoperithecia-1DNA polymerase delta catalytic subunithistone-lysine N-methyltransferase26S protease regulatory subunit 4elongator complex protein 3N-acetyltransferase-5ascospore lethal-1, variant 1ascospore lethal-1proteasome component C11, variant 1proteasome component C11chromodomain-helicase-DNA-binding protein 4transcriptional activator protein acu-15histone acetyltransferase type B subunit 2proteasome component Pre5G-protein alpha subunitG-protein alpha subunit, variant 1hypothetical proteinzinc finger transcription factor-51fungal specific transcription factor domain-containing proteinnuclear protein SNF4nuclear protein SNF4, variant 1translation initiation factor eIF-2B subunit deltatan spore proteinnucleosome assembly proteinC2H2 transcription factorchromatin assembly-1 proteinhypothetical proteinDNA excision repair proteinproteasome subunit alpha type 6endo-1,4-beta-xylanase 2exoglucanase 3ADP-ribosylation factor 6actin-6BEAK-2endo-beta-1,4-D-xylanaseendo-1,3-beta-glucanasemating-type switching protein swi10hypothetical proteinpost-transcriptional silencing protein QDE-2post-transcriptional silencing protein QDE-2, variant 1HLH transcription factorUvrD/REP helicaseplasma membrane calcium-transporting ATPase 3chromatin regulatory protein sir2mst2Snf2 helicase-2eukaryotic peptide chain release factor GTP-binding subunit, variant 1eukaryotic peptide chain release factor GTP-binding subunitpolyadenylate-binding proteinexo-beta-1,3-glucanaseBeta-1,3-exoglucanasechromatin remodelling complex ATPase chain ISW1eukaryotic translation initiation factor 3 subunit 2HEC/Ndc80p family proteinAp1-like proteinADA-5hypothetical proteinproteasome regulatory particleglucose-regulated proteinexoglucanase 3female fertility-7heterochromatin protein 1cross-pathway control protein 1Assimilatory sulfite reductaseproteasome component Y13Endo-1,4-beta-xylanasecalcium P-type ATPaseendoglucanase Vglucan endo-1,3-beta-glucosidaseexoglucanase 1endoglucanase EG-1COL-23xylanaseproteasome component PRE3Alpha-glucosidasehistone chaperone asf-126S proteasome regulatory subunit Rpn2helicase swr-1histone H1, variant 1Histone H1hypothetical proteinG-protein coupled receptorSET-5fungal specific transcription factorelongation factor 1-betaquinic acid utilization activatorDNA-directed polymerase kappaDNA-directed polymerase kappa, variant 1Histone H2AHistone H2BN-acetyltransferase-4translation initiation factor eif-2b epsilon subunitMitogen-activated protein kinase 2, variantMitogen-activated protein kinase 2, variantProteasome regulatory particle subunitPolygalacturonaseRSC complex subunit26S proteasome non-ATPase regulatory subunit 8DNA repair and recombination protein RAD54hypothetical proteintranscriptional activator spt726S protease regulatory subunit 6Bhistone acetyltransferaseendoglucanase II26S proteasome non-ATPase regulatory subunit 3TAH-2eukaryotic translation initiation factor 3Alpha-amylaseDNA mismatch repair protein msh6Na or K P-type ATPaseeukaryotic translation initiation factor 3 subunit 6Neurospora crassamulticellularity

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