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Subunit order of eukaryotic TRiC/CCT chaperonin by cross-linking, mass spectrometry, and combinatorial homology modeling

author

Michael Levitt

1947 -

Nir Kalisman

2000 -

published in: Proceedings of the National Academy of Sciences of the United States of America

date of publication: 2012-02-01

language: English

Cites articles 36

Date

Title

Authors

2011-06-24

The crystal structure of yeast CCT reveals intrinsic asymmetry of eukaryotic cytosolic chaperonins

Laurence Pearl, Keith Willison
2011-01

Crystal structure of the open conformation of the mammalian chaperonin CCT in complex with tubulin

Guillermo Montoya, José María Valpuesta, Guillermo de Cárcer, Marcos Malumbres, Carol V. Robinson
2010-11-22

Structure of the 26S proteasome from Schizosaccharomyces pombe at subnanometer resolution

Ruedi Aebersold, Martin Beck
2010-10-26

The beginning of a beautiful friendship: cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

Juri Rappsilber
2010-03-31

Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics

Martin Beck, Ruedi Aebersold, Abdullah Kahraman, Alexander Leitner
2010-03-16

4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement

Wah Chiu, Judith Frydman, Steven J. Ludtke, Aindrila Mukhopadhyay
2010-02-17

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

Juri Rappsilber, Jimi-Carlo Bukowski-Wills, Michael Nilges, Lutz Fischer, Zhuo A Chen, Anass Jawhari, Patrick Cramer
2010-01-21

Mechanism of folding chamber closure in a group II chaperonin

Michael Levitt, Gunnar F. Schröder, Wah Chiu, Judith Frydman, Junjie Zhang, Steven J. Ludtke
2010-01-01

Insights into the intra-ring subunit order of TRiC/CCT: a structural and evolutionary analysis

Nir Kalisman, Michael Levitt
2010-06-25

Equivalent mutations in the eight subunits of the chaperonin CCT produce dramatically different cellular and gene expression phenotypes

Keith Willison
2009-06-12

Improved results in proteomics by use of local and peptide-class specific false discovery rates

Juri Rappsilber
2009-06-30

Structural insights into the calmodulin-Munc13 interaction obtained by cross-linking and mass spectrometry

Christian Griesinger, Kalina Dimova, Nils Brose, Stefan Kalkhof, Christian Ihling, Andrea Sinz
2008-12

Defining the TRiC/CCT interactome links chaperonin function to stabilization of newly made proteins with complex topologies

Mark Bender Gerstein, Yu Xia, Judith Frydman
2008-09-01

Chances and pitfalls of chemical cross-linking with amine-reactive N-hydroxysuccinimide esters

Stefan Kalkhof, Andrea Sinz
2008-06-08

Mechanism of lid closure in the eukaryotic chaperonin TRiC/CCT

Andrej Šali, Wah Chiu, Judith Frydman, Steven J. Ludtke
2008-04-22

A three-dimensional homology model of lipid-free apolipoprotein A-IV using cross-linking and mass spectrometry

Matthew R. Tubb, William S Davidson
2008-03-09

Identification of cross-linked peptides from large sequence databases

Ruedi Aebersold, Martin Beck
2007-11-01

Annexin A2/P11 interaction: new insights into annexin A2 tetramer structure by chemical crosslinking, high-resolution mass spectrometry, and computational modeling

Karl Mechtler, Stefan Kalkhof
2007-04-29

Essential function of the built-in lid in the allosteric regulation of eukaryotic and archaeal chaperonins

Wah Chiu, Judith Frydman
2007-02-16

The inter-ring arrangement of the cytosolic chaperonin CCT

Jaime Martín Benito Romero, Jasminka Boskovic, Keith Willison, José María Valpuesta, José L Carrascosa
2007-10-05

Structural Analysis of Multiprotein Complexes by Cross-linking, Mass Spectrometry, and Database Searching

Davide Cittaro, Andrea Musacchio, Juri Rappsilber
2006-10-01

Identification of the TRiC/CCT substrate binding sites uncovers the function of subunit diversity in eukaryotic chaperonins

Christoph Spiess, Amie J McClellan, Judith Frydman
2006-09-01

Protein cross-linking analysis using mass spectrometry, isotope-coded cross-linkers, and integrated computational data processing

Ruedi Aebersold
2006-09-01

All three chaperonin genes in the archaeon Haloferax volcanii are individually dispensable

José María Valpuesta, Georgia Kapatai, Justin L.P. Benesch, Carol V. Robinson, José L Carrascosa
2005-02-06

Sequential ATP-induced allosteric transitions of the cytoplasmic chaperonin containing TCP-1 revealed by EM analysis

Sharon G. Wolf
2004-11-16

Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry

Alma L Burlingame, Peter Walter
2004-11-01

Mechanism of the eukaryotic chaperonin: protein folding in the chamber of secrets

Christoph Spiess, Anne S Meyer, Judith Frydman
2004-01-01

Crystal structures of the group II chaperonin from Thermococcus strain KS-1: steric hindrance by the substituted amino acid, and inter-subunit rearrangement between two crystal forms

Masafumi Yohda, Kunio Miki
2001-08-01

Analysis of the interaction between the eukaryotic chaperonin CCT and its substrates actin and tubulin

Oscar Llorca, Jaime Martín Benito Romero, Paulino Gómez-Puertas, Keith Willison, José María Valpuesta
2001-08-01

Gene duplication and the evolution of group II chaperonins: implications for structure and function
2000-01-01

Purification of the cytosolic chaperonin TRiC from bovine testis
1998-04-03

Crystal structure of the thermosome, the archaeal chaperonin and homolog of CCT

Article - wd:Q35779424

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