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The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography

author

Gerrit Groenhof

Petra Båth

Peter Berntsen

Matthijs R Panman

Heikki Takala

Jake D Koralek

Heli Lehtivuori

Suraj Pandey

Oskar Berntsson

Emil Gustavsson

Ishwor Poudyal

Janne Ihalainen

published in: Scientific Reports

date of publication: 2016-10-19

language: English

Cites articles 40

Date

Title

Authors

2016-04-18

Data processing pipeline for serial femtosecond crystallography at SACLA

Takanori Nakane, Makina Yabashi
2016-03-01

Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion
2015-10-23

Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation

Ilme Schlichting, Sébastien Boutet, Marcel Heinz, Konstantin Falahati, Henrik T Lemke, Gerhard Hummer
2015-04-16

Diverse application platform for hard X-ray diffraction in SACLA (DAPHNIS): application to serial protein crystallography using an X-ray free-electron laser

Takaki Hatsui, Mamoru Suzuki, Makina Yabashi
2015-02-18

X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome

Allen M Orville, George C. Schatz
2015-01

Grease matrix as a versatile carrier of proteins for serial crystallography

Dongqing Pan, Tetsuya Masuda, Mamoru Suzuki, Michio Murata, Makina Yabashi
2014-12-01

Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein

Shibom Basu, Nadia A. Zatsepin, Kanupriya Pande, Michael Heymann, Daniel James, Thomas D. Grant, Anton Barty, Oleksandr Yefanov, Carolin Seuring, Henry N. Chapman, Raimund Fromme, Chelsie E. Conrad, Dominik Oberthuer, Shatabdi Roy-Chowdhury, Christopher Kupitz, Jason Koglin, Sébastien Boutet, Cornelius Gati, Jason Tenboer, Abbas Ourmazd, Peter Schwander, Keith R Moffat, Dingjie Wang, Petra Fromme, Despina Milathianaki, Mark Hunter, Uwe Weierstall
2014-09-24

Origins of fluorescence in evolved bacteriophytochromes

Heli Lehtivuori, Janne Ihalainen, Katrina T. Forest
2014-07-07

FTIR Spectroscopy Revealing Light-Dependent Refolding of the Conserved Tongue Region of Bacteriophytochrome

John T M Kennis
2014-08-29

Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion
2014-07-15

Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome
2014-05-29

Cheetah: software for high-throughput reduction and analysis of serial femtosecond X-ray diffraction data

Anton Barty, Thomas A White, Henry N. Chapman, Max F Hantke, Richard Kirian, Filipe R N C Maia
2014-07

Determination of damage-free crystal structure of an X-ray-sensitive protein using an XFEL

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Signal amplification and transduction in phytochrome photosensors

Maria Hoernke, Stephan Niebling, Heikki Takala, Heli Lehtivuori, Andreas Menzel, Oskar Berntsson, Janne Ihalainen
2014-04-21

Dynamic inhomogeneity in the photodynamics of cyanobacterial phytochrome Cph1.

John Clark Lagarias
2014-03-01

Development of an X-ray pixel detector with multi-port charge-coupled device for X-ray free-electron laser experiments

Makina Yabashi
2014-01-01

Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography

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2014-08-21

Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light

Shuyi Zhang, John Clark Lagarias
2013-03-13

Phytochrome cytoplasmic signaling
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Fluorescence properties of the chromophore-binding domain of bacteriophytochrome from Deinococcus radiodurans

Heli Lehtivuori, Ilona Rissanen, Heikki Takala, Jaana Bamford, Janne Ihalainen
2012-05-25

Linking Crystallographic Model and Data Quality

Kay Diederichs
2012-03-02

Structure-guided Engineering Enhances a Phytochrome-based Infrared Fluorescent Protein

Kenneth A. Satyshur, Katrina T. Forest
2011-09-27

Accessing protein conformational ensembles using room-temperature X-ray crystallography

Nathaniel Echols, Henry van den Bedem, James S Fraser
2011-03-18

REFMAC5 for the refinement of macromolecular crystal structures

Pavol Skubák, Roberto A Steiner, Robert A Nicholls
2011-02-15

Two ground state isoforms and a chromophore D-ring photoflip triggering extensive intramolecular changes in a canonical phytochrome
2011-02-03

Femtosecond X-ray protein nanocrystallography

Ilme Schlichting, Marc Messerschmidt, Sébastien Boutet, Uwe Weierstall, Anton Barty, Lukas Lomb, Joachim Ullrich, Artem Rudenko, Heinz Graafsma, Sascha Epp, Benjamin Erk, Andrew V Martin, Michael J. Bogan, Henry N. Chapman, Hans Olof Jönsson, Richard Kirian, Thomas A White, Nicusor Timneanu, Petra Fromme, Andrew Aquila, Joachim Schulz, R Bruce Doak, Robert Shoeman, Daniel Rolles, Lutz M Foucar, Nils Kimmel, Georg Weidenspointner, Mengning Liang, Miriam Barthelmess, Carl Caleman, Jacek Krzywinski, Sasa Bajt, Lars Gumprecht, Benedikt Rudek, André Hömke, Daniel Pietschner, Lothar Strüder, Heike Soltau, Kai-Uwe Kühnel, John D Bozek, Stefan Hau-Riege, Janos Hajdu, Marvin Seibert, Andrea Rocker, Martin Svenda, Karol Nass, Robert Andritschke, Claus Dieter Schröter, Faton Krasniqi, Mario Bott, Ingo Grotjohann, Thomas R M Barends, Richard Neutze, Stefano Marchesini, Raimund Fromme, Sebastian Schorb, Daniela Rupp, Tais Gorkhover, Inger Andersson, Helmut Hirsemann, Guillaume Potdevin, Daniel P Deponte, Raymond G Sierra, Garth J Williams, Filipe R N C Maia, Günter Hauser, Jakob Andreasson, Christoph Bostedt, Stephan Stern, John Spence, Dmitri Starodub, Carlo Schmidt, Hubert Gorke, Nicola Coppola, Christina Y Hampton, Mark Hunter
2011-02-01

Bacterial phytochromes: more than meets the light

Katrina T. Forest
2011-02-16

Structure-factor analysis of femtosecond microdiffraction patterns from protein nanocrystals

Richard Kirian, Henry N. Chapman, Thomas A White, Anton Barty, Andrew V Martin, Lukas Lomb, Andrew Aquila, Petra Fromme
2010-12-30

Primary reactions of bacteriophytochrome observed with ultrafast mid-infrared spectroscopy.

John T M Kennis
2009-01-29

Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy

Renee R. Frontiera, Richard A. Mathies
2008-09-23

Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: Photoconversion and signal transduction
2008-09-23

The structure of a complete phytochrome sensory module in the Pr ground state

Lars-Oliver Essen

Article - wd:Q36167148

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