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Promoter directionality is controlled by U1 snRNP and polyadenylation signals

author

Xuebing Wu

2000 -

published in: Nature

date of publication: 2013-06-23

language: English

Cites articles 34

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Title

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2013-02-04

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Richard A. Young
2012-09-13

Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs
2012-10-01

Promoter-proximal polyadenylation sites reduce transcription activity

Søren Lykke-Andersen, Torben Heick Jensen
2012-10-01

Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans

Karen Adelman
2012-09-06

Landscape of transcription in human cells

Roderic Guigó i Serra, Sarah Djebali, Tim Hubbard, Mark Bender Gerstein, Yoshihide Hayashizaki, Piero Carninci, Barbara J. Wold, Pedro G. Ferreira, Stilianos Antonarakis, Carrie Chase Davis
2012-07-06

U1 snRNP determines mRNA length and regulates isoform expression

Anna Maria Pinto, Daisuke Kaida
2012-03-27

A quantitative atlas of polyadenylation in five mammals
2012-11-27

An upstream promoter element blocks the reverse transcription of the mouse insulin-degrading enzyme gene
2012-06-07

Genome-wide analysis of pre-mRNA 3' end processing reveals a decisive role of human cleavage factor I in the regulation of 3' UTR length.

Mihaela Zavolan, Andreas R Gruber
2011-09-01

Ending the message: poly(A) signals then and now

Nicholas Jarvis Proudfoot
2011-06-28

Antisense RNA polymerase II divergent transcripts are P-TEFb dependent and substrates for the RNA exosome

Ryan Flynn
2011-05-19

PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters

Eivind Valen, Albin Sandelin, Torben Heick Jensen
2011-04-01

Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells

Joshua J Waterfall
2011-02-16

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2011-05-02

Cutadapt removes adapter sequences from high-throughput sequencing reads

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2010-10-05

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U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

Daisuke Kaida
2010-04-30

c-Myc regulates transcriptional pause release

Ryan Flynn, Richard A. Young
2009

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Mihai Pop, Steven Salzberg, Ben Langmead, Cole Trapnell
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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
2008-12-04

Divergent transcription from active promoters

Stuart S Levine, Ryan Flynn, Richard A. Young
2008-12-04

RNA exosome depletion reveals transcription upstream of active human promoters

Søren Lykke-Andersen, Mikkel Heide Schierup, Torben Heick Jensen
2008

Model-based analysis of ChIP-Seq (MACS)

Chad Nusbaum, Richard M. Myers, Tao Liu, Yong Zhang, Myles Brown, Wei Li, Bradley Bernstein
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Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.
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Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

Bertrand Séraphin, Alain Jacquier, Abdelkader Namane
2005-06-03

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

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A new yeast poly(A) polymerase complex involved in RNA quality control

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Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation

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2004-01-01

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The 64-kilodalton subunit of the CstF polyadenylation factor binds to pre-mRNAs downstream of the cleavage site and influences cleavage site location

Clinton C MacDonald

Article - wd:Q37038710

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