Inventaire - your friends and communities are your best library

Computational approaches for microRNA studies: a review

published in: Mammalian Genome

date of publication: 2009-12-15

main subject: microRNA

Cites articles 95

Date

Title

Authors

2009-01-19

Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer

Keun Hur, V. Narry Kim
2009-06-26

Clustered microRNAs' coordination in regulating protein-protein interaction network

Shunmin He
2009-05-11

miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments

David Langenberger, Michael Hackenberg, Juan M Falcón-Pérez
2009-07-01

Limitations and possibilities of small RNA digital gene expression profiling.

Georges E Janssens, Elzo de Wit
2009-06-17

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

Robert B. Darnell
2008-10-27

The database of experimentally supported targets: a functional update of TarBase

Martin Reczko
2008-03-01

The eukaryotic genome as an RNA machine

Marcel E. Dinger, John S. Mattick
2008-09-01

mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein-enriched transcripts

Molly Hammell
2008-01-01

Analysis of large-scale sequencing of small RNAs
2008-02

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

Nahum Sonenberg, Suvendra Nath Bhattacharyya, Witold Filipowicz
2008-12-21

Tandem array-based expression screens identify host mRNA targets of virus-encoded microRNAs

Joseph Ziegelbauer
2008-09-23

A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence

Joshua J Forman
2008-11-18

CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets

Charles Addo-Quaye, Webb Miller
2008-10-13

MicroRNA-directed transcriptional gene silencing in mammalian cells
2008-02-05

MicroRNA-373 induces expression of genes with complementary promoter sequences

Rajvir Dahiya
2008-09-04

Widespread changes in protein synthesis induced by microRNAs

Nikolaus Rajewsky
2008-09-04

The impact of microRNAs on protein output

Judit Villén, David P. Bartel, Steven P. Gygi, Fernando Camargo
2008-08-01

Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells

Stuart S Levine, Garrett M Frampton, Richard A. Young, David P. Bartel, Marius Wernig, Rudolf Jaenisch, Alexander Marson, Nancy M Hannett, Matthew G Guenther, Jamie J Newman, Thomas Volkert, Tobias Brambrink
2008-12

Detecting microRNA binding and siRNA off-target effects from expression data

Cei Abreu-Goodger, Stijn van Dongen, Anton J. Enright
2008-04

Discovering microRNAs from deep sequencing data using miRDeep

Jonas Maaskola, Nikolaus Rajewsky, Wei Chen
2008-10-24

Prediction of human miRNAs using tissue-selective motifs in 3' UTRs

Hsueh-Fen Juan, Wen-Hsiung Li
2008-10-15

Analysis of regulatory network topology reveals functionally distinct classes of microRNAs

Don Zack
2008-10-23

MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation

Isidore Rigoutsos
2008-11-01

Chromatin structure analyses identify miRNA promoters

David E. Fisher
2008-09-01

A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity

Frederick P. Roth, Marian Walhout, Molly Hammell, Lynn Doucette-Stamm
2008-05-29

A computational screen for mouse signaling pathways targeted by microRNA clusters

Jianzhen Xu
2008-03-30

The regulatory activity of microRNA* species has substantial influence on microRNA and 3' UTR evolution

Eric C Lai
2008-06-09

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

Blake Meyers, Pamela J. Green
2007-06-29

A mammalian microRNA expression atlas based on small RNA library sequencing

Chris Sander, Thomas Tuschl, Veit Hornung, Bernhard Schermer, Thomas Benzing, Markus Landthaler, Sébastien Pfeffer, Mihaela Zavolan, Gabriella De Vita, Gunther Hartmann, Nina Papavasiliou, Valerio Fulci, Daniela Frezzetti, Robin Foà, Peter Lichter, Alice O Kamphorst, Robert Sheridan, Roman-Ulrich Müller
2007-06-28

The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila

Eric C Lai
2007-06-05

Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR

Joan A. Steitz
2007-02-27

Regulatory circuit of human microRNA biogenesis

Bino John

Article - wd:Q37655634

Welcome to Inventaire

the library of your friends and communities

learn more