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TANTIGEN: a comprehensive database of tumor T cell antigens

author

Honghuang Lin

Vladimir Brusic

published in: Cancer Immunology, Immunotherapy

date of publication: 2017-03-09

main subject: database

Cites articles 37

Date

Title

Authors

2017-02-01

Mass Spectrometry Profiling of HLA-Associated Peptidomes in Mono-allelic Cells Enables More Accurate Epitope Prediction

Nir Hacohen, John Sidney, Siranush Sarkizova
2016-01-20

T-cell recognition is shaped by epitope sequence conservation in the host proteome and microbiome

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Going viral: chimeric antigen receptor T-cell therapy for hematological malignancies

Carl H. June
2015-09-01

Neoepitopes of Cancers: Looking Back, Looking Ahead
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Mutant MHC class II epitopes drive therapeutic immune responses to cancer

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αβ TCR-mediated recognition: relevance to tumor-antigen discovery and cancer immunotherapy
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COSMIC: exploring the world's knowledge of somatic mutations in human cancer

Jon Teague, Michael Stratton
2015-02-25

Automated benchmarking of peptide-MHC class I binding predictions

Thomas Trolle, Morten Nielsen, Alessandro Sette, Bjoern Peters, Ole Lund, John Sidney, Jason A Greenbaum, Yohan Kim
2014-12-08

Tumor antigens as proteogenomic biomarkers in invasive ductal carcinomas

Ole Winther, Lars Olsen, Vladimir Brusic
2014

Forward Vaccinology: CTL Targeting Based upon Physical Detection of HLA-Bound Peptides
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Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity

Alessandro Sette, Jorge Duitama, Ion I. Mandoiu, John Sidney, Brian M. Baker, Steven A Corcelli
2014-11-19

Genetic basis for clinical response to CTLA-4 blockade in melanoma

Alexis Desrichard, Logan A. Walsh, Phillip Wong, Travis Hollmann, Kasthuri Kannan, Jedd D Wolchok, Antoni Ribas
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The immune epitope database (IEDB) 3.0.

Julia Ponomarenko, Alessandro Sette, Bjoern Peters, Randi Vita, James Overton, Jason A Greenbaum, Jason R Cantrell
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Bioinformatics for cancer immunotherapy target discovery

Lars Olsen, Ole Winther, Vladimir Brusic
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Big data analytics in immunology: a knowledge-based approach

Jing Sun, Lou Chitkushev, Vladimir Brusic
2013-01-03

Pathways of antigen processing

Pamela A. Wearsch, Janice S. Blum
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Tumor exome analysis reveals neoantigen-specific T-cell reactivity in an ipilimumab-responsive melanoma

Arno Velds, Ton Schumacher, Bianca Heemskerk
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Mining exomic sequencing data to identify mutated antigens recognized by adoptively transferred tumor-reactive T cells

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Literature classification for semi-automated updating of biological knowledgebases

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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

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NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11

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NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence

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Article - wd:Q38372371

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