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mRNA interactome capture in mammalian cells

author

Markus Landthaler

published in: Methods

date of publication: 2017-07-11

Cites articles 35

Date

Title

Authors

2017-01-30

Comprehensive Identification of mRNA-Binding Proteins of Leishmania donovani by Interactome Capture

Leonard J Foster
2016-06-08

Identification of RNA-binding Proteins in Macrophages by Interactome Capture

Matthias Hentze, Stuart K Archer, Alfredo Castelló, Jeroen Krijgsveld, Thomas Preiss, Björn Usadel, Gernot Marx
2016-07-21

The Cardiomyocyte RNA-Binding Proteome: Links to Intermediary Metabolism and Heart Disease

Matthias Hentze, Alfredo Castelló, Sophia Foehr, Christian K Frese, Sebastian Kurscheid, Jeroen Krijgsveld, Thomas Preiss
2016-04-28

The mRNA-bound proteome of the early fly embryo

Markus Landthaler, Uwe Ohler
2016-07-05

Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila

Matthias Hentze, Vasily Sysoev, Christian K Frese, Jeroen Krijgsveld, Alfredo Castelló, Anne Ephrussi
2016-10-11

In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings

Matthias Hentze, Marlene Reichel, Yalin Liao, Mandy Rettel, Chikako Ragan, Rastislav Horos, Thomas Preiss, Anthony A. Millar, Anne-Marie Alleaume
2016-07-11

The RNA-binding protein repertoire of Arabidopsis thaliana

claudius marondedze, Kathryn Lilley
2016-07-05

The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum

Laurence Florens, Anita Saraf, Evelien M. Bunnik, Gayani Batugedara
2016-03-28

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP)

Eric Van Nostrand, Balaji Sundararaman, Steven M Blue, Mitchell Guttman
2016-05-01

Regulation of Poly(A) Tail and Translation during the Somatic Cell Cycle

Hyeshik Chang, V. Narry Kim
2016-07-21

mTAIL-seq reveals dynamic poly(A) tail regulation in oocyte-to-embryo development

Hyeshik Chang, V. Narry Kim, Jaechul Lim
2015-12-03

The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs

Wolfgang Huber, Matthias Hentze, Benedikt M Beckmann, Rastislav Horos, Bernd Fischer, Tomaž Curk, Sophia Foehr, Jeroen Krijgsveld, Anne-Marie Alleaume, Thomas Schwarzl
2015-11-23

Conserved mRNA-binding proteomes in eukaryotic organisms

Ana M Matia-Gonzalez
2015-12-01

Unique features of long non-coding RNA biogenesis and function
2014-05-01

Principles and properties of eukaryotic mRNPs
2014-11-04

A census of human RNA-binding proteins

Thomas Tuschl, Markus Hafner
2014-06-17

Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ.

Marco Y. Hein, Jürgen Cox, Matthias Mann
2014-02-27

TAIL-seq: genome-wide determination of poly(A) tail length and 3' end modifications

Hyeshik Chang, V. Narry Kim, Jaechul Lim
2013-08-04

The RNA-binding protein repertoire of embryonic stem cells

Matthias Hentze, S. Chul Kwon, Bernd Fischer, Alfredo Castelló, Jeroen Krijgsveld, V. Narry Kim
2013-10

4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response

Michaela Rohrmoser, Anita Gruber-Eber, Caroline C Friedel, Lars Dölken
2012-06-08

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts

Richard Bonneau
2012-06-08

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins

Thomas Preiss, Benedikt M Beckmann, David T Humphreys, Bernd Fischer, Norman Davey, Lars M Steinmetz, Jeroen Krijgsveld, Matthias Hentze
2012

Identification of RNA-protein interaction networks using PAR-CLIP

Thomas Tuschl, Markus Hafner, Manuel Ascano
2012-11-09

The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus

Alper Kucukural, Can Cenik, Melissa J. Moore
2011-12-01

In vivo and transcriptome-wide identification of RNA binding protein target sites

Marlon Stoeckius, Dominic Grün, Nikolaus Rajewsky
2010-04-02

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

Thomas Tuschl, Jean Hausser, Markus Landthaler, Markus Hafner, Mihaela Zavolan, Mathias Munschauer, Manuel Ascano
2010-07-04

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

Julian König, Kathi Zarnack, Tomaž Curk, Blaž Zupan, Jernej Ule
2008-11-27

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

Tyson A Clark, Jernej Ule, Robert B. Darnell
2008-07-24

High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay

Reinhard Hoffmann, Caroline C Friedel, Thorsten Forster, Peter Ghazal, Ralf Zimmer, Lars Dölken, Zsolt Ruzsics
2008-12

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
2007-07

RNA regulons: coordination of post-transcriptional events
2005-09-02

From birth to death: the complex lives of eukaryotic mRNAs

Article - wd:Q38678309

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