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Transcriptional regulation shapes the organization of genes on bacterial chromosomes

forfatter

Sarath Chandra Janga

udgivet i: Nucleic Acids Research

dato for udgivelse: 2009-04-16

sprog: engelsk

Cites articles 55

Date

Titel

Forfattere

2008-01-01

Single-molecule approach to molecular biology in living bacterial cells
2008-04-09

The role of DNA-binding specificity in the evolution of bacterial regulatory networks

Vladimir Espinosa Angarica, Bruno Contreras-Moreira, Julio Collado-Vides, Irma Lozada-Chávez
2008-05-02

Are DNA transcription factor proteins maxwellian demons?

Alexander Grosberg
2008-03-10

Analyzing stochastic transcription to elucidate the nucleoid's organization

Alessandra Riva
2008-02-27

Protein abundance profiling of the Escherichia coli cytosol

Thorsten Schmidt, Juri Rappsilber, Franz-Ulrich Hartl
2008-02-19

Dissecting the logical types of network control in gene expression profiles

Marc-Thorsten Hütt
2008-10-03

Principles of transcriptional regulation and evolution of the metabolic system in E. coli

Mohan Madan Babu
2008-05-29

Functional organisation of Escherichia coli transcriptional regulatory network

Sarath Chandra Janga, Denis Thieffry, Agustino Martínez-Antonio
2008-03-22

Protein--DNA interactions: reaching and recognizing the targets
2007-08-20

How gene order is influenced by the biophysics of transcription regulation

Zeba Wunderlich, Mikhail Gelfand
2007-05-01

Probing transcription factor dynamics at the single-molecule level in a living cell

Johan Elf
2007-03-19

Hierarchy and feedback in the evolution of the Escherichia coli transcription network
2007-02-01

A common topology for bacterial and eukaryotic transcription initiation?
2007-01

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

Simon Kasif, Boris Hayete
2007-10-15

Structure and evolution of gene regulatory networks in microbial genomes.

Sarath Chandra Janga, Julio Collado-Vides
2007-01-12

Internal versus external effector and transcription factor gene pairs differ in their relative chromosomal position in Escherichia coli.

Sarath Chandra Janga, Agustino Martínez-Antonio, Julio Collado-Vides
2007-07-02

Generalized theory of site-specific DNA-protein interactions

Rajamanickam Murugan
2007-02-05

What are the molecular ties that maintain genomic loops?

Davide Marenduzzo
2006-12-24

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation

Edward Marcotte, Christine Vogel
2006-09-26

Genomic analysis of the hierarchical structure of regulatory networks

Mark B. Gerstein
2006-06-03

The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: a molecular perspective

Remus T Dame
2006-01-31

Ab initio genotype-phenotype association reveals intrinsic modularity in genetic networks
2006-04-27

Shape and compaction of Escherichia coli nucleoids
2006-01-01

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

Julio Collado-Vides, César Bonavides-Martínez, Socorro Gama-Castro
2006-07-27

Single molecule measurements of repressor protein 1D diffusion on DNA

Robert Hamilton Austin
2005-10-21

Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA.
2005-01-01

The network of transcriptional interactions imposes linear constrains in the genome.

Ricardo Menchaca-Méndez, Sarath Chandra Janga, Julio Collado-Vides
2005-11-20

Adaptive evolution of bacterial metabolic networks by horizontal gene transfer.

Balázs Papp, Martin J. Lercher
2005-11-28

Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli.

Agustino Martínez-Antonio, Sarath Chandra Janga, Julio Collado-Vides
2005-02-10

Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli
2004

Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach
2004-07-01

Topological domain structure of the Escherichia coli chromosome

Nicholas R. Cozzarelli

Artikel - wd:Q41299259

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