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CRISPy-web: An online resource to design sgRNAs for CRISPR applications.

forfatter

Lasse Ebdrup Pedersen

Kai Blin

Tilmann Weber

udgivet i: Synthetic and systems biotechnology

dato for udgivelse: 2016-02-12

main subject: CRISPR, RNA design

Cites articles 25

Date

Titel

Forfattere

2015-11-24

Characterization of Staphylococcus aureus Cas9: a smaller Cas9 for all-in-one adeno-associated virus delivery and paired nickase applications

McKensie A Collins, Anand V R Kornepati, Bryan R. Cullen
2015-11

Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems

Silvana Konermann, Eugene Koonin
2015-11-02

WU-CRISPR: characteristics of functional guide RNAs for the CRISPR/Cas9 system

Weijun Liu
2015-10-22

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system

Eugene Koonin, Aviv Regev, John van der Oost, Patrick Essletzbichler, Jonathan S. Gootenberg, Kira Makarova, Omar O Abudayyeh, Bernd Zetsche, Ian M Slaymaker, Julia Joung
2015-07-07

CrEdit: CRISPR mediated multi-loci gene integration in Saccharomyces cerevisiae

Alex Toftgaard Nielsen, Tadas Jakočiūnas, Susanne M Germann, Irina Borodina, Jay Keasling, Michael Krogh Jensen
2015-05-14

WGE: a CRISPR database for genome engineering

Tiago Grego
2015-05-06

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

Daniel Krug, Kai Blin, Hyun Uk Kim, Marnix H Medema, Tilmann Weber, Michael A. Fischbach, Eriko Takano, Rainer Breitling, Rolf Müller, Sang Yup Lee, Robert E. Bruccoleri
2015

CCTop: An Intuitive, Flexible and Reliable CRISPR/Cas9 Target Prediction Tool

Manuel Stemmer, Thomas Thumberger, Joachim Wittbrodt
2015-03-25

CRISPR-Cas9 Based Engineering of Actinomycetal Genomes

Sang Yup Lee, Yaojun Tong, Pep Charusanti, Tilmann Weber
2015-01-28

Multiplex metabolic pathway engineering using CRISPR/Cas9 in Saccharomyces cerevisiae

Lasse Ebdrup Pedersen, Michael Krogh Jensen, Tadas Jakočiūnas, Jay Keasling
2014-12-08

High-efficiency multiplex genome editing of Streptomyces species using an engineered CRISPR/Cas system

Yajie Wang
2014-11-28

Genome editing. The new frontier of genome engineering with CRISPR-Cas9

Emmanuelle Charpentier, Jennifer Doudna
2014-06-23

sgRNAcas9: a software package for designing CRISPR sgRNA and evaluating potential off-target cleavage sites
2014-05-26

CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing

James A Gagnon, Eivind Valen, George Church
2014-01-03

Genome-scale CRISPR-Cas9 knockout screening in human cells

David E Root, John G Doench
2014-05-22

Accelerating genome editing in CHO cells using CRISPR Cas9 and CRISPy, a web-based target finding tool

Lasse Ebdrup Pedersen, Thomas Beuchert Kallehauge, Alex Toftgaard Nielsen, Helene Faustrup Kildegaard, Carlotta Ronda, Henning Gram Hansen, Michael J Betenbaugh
2013-09-29

Orthogonal Cas9 proteins for RNA-guided gene regulation and editing

Kevin M. Esvelt, Stephanie J Yaung, George Church
2013-08-01

Targeted genome modification of crop plants using a CRISPR-Cas system.

Jin-Long Qiu
2013-07-21

DNA targeting specificity of RNA-guided Cas9 nucleases

Patrick D Hsu, Eli J Fine, Xuebing Wu, Thomas J. Cradick
2013-06-03

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

Marnix H Medema, Rainer Breitling, Eriko Takano, Kai Blin, Michael A. Fischbach
2013-01-29

RNA-guided editing of bacterial genomes using CRISPR-Cas systems

David Bikard
2012-06-28

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity

Martin Jínek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer Doudna, Emmanuelle Charpentier
2011-06-14

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

Marnix H Medema, Eriko Takano, Rainer Breitling, Victor de Jager, Kai Blin, Michael A. Fischbach
2010-01-01

CRISPR/Cas, the immune system of bacteria and archaea

Philippe Horvath, Rodolphe Barrangou
2009-03-20

Biopython: freely available Python tools for computational molecular biology and bioinformatics

Iddo Friedberg, Peter J Cock, Tiago Antao, Brad Chapman, Cymon John Cox, Thomas Hamelryck, Bartek Wilczynski, Andrew Dalke

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