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RNA editing by ADAR1 leads to context-dependent transcriptome-wide changes in RNA secondary structure.

author

Noam Stern-Ginossar

Ninette Amariglio

Gidi Rechavi

1953 -

Erez Y. Levanon

Karen Cesarkas

Victoria Marcu-Malina

Itamar Goldstein

Eran Eyal

Yaniv Lerenthal

Nitzan Kol

Ayelet Di Segni

Efrat Glick Saar

Sarit Farage-Barhom

published in: Nature Communications

date of publication: 2017-11-13

language: English

Cites articles 78

Date

Title

Authors

2016-08-02

ADAR1 is vital for B cell lineage development in the mouse bone marrow

Gidi Rechavi, Ninette Amariglio, Victoria Marcu-Malina, Itamar Goldstein
2016-06-30

ADAR1 deletion induces NFκB and interferon signaling dependent liver inflammation and fibrosis

Jasmine Jacob-Hirsch, Shirley Oren Ben-Shoshan, Gidi Rechavi, Ninette Amariglio, Alon Harmelin, Michal Safran, Orit Pappo, Victoria Marcu-Malina, Itamar Goldstein
2016-04-05

The role of RNA editing by ADAR1 in prevention of innate immune sensing of self-RNA.

Jacki E Heraud-Farlow, Carl R Walkley
2016-02-10

The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA

Dan Dominissini, Moshe Shay Ben-Haim, Mali Salmon-Divon, Louis C Dore, Gidi Rechavi, Ninette Amariglio, Sharon Moshitch-Moshkovitz, Eran Eyal, Eyal Peer, Nitzan Kol, Ayelet Di Segni, Vera Hershkovitz
2016-02-01

ADAR1 Suppresses the Activation of Cytosolic RNA-Sensing Signaling Pathways to Protect the Liver from Ischemia/Reperfusion Injury

Timothy Billiar
2016-01-27

Editing of Cellular Self-RNAs by Adenosine Deaminase ADAR1 Suppresses Innate Immune Stress Responses

Jin Billy Li
2016-09-05

Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation.

Konstantinos Stellos, Reinier A. Boon, Shizuka Uchida, Till Keller, Lars Maegdefessel, Harald Schwalbe, Per Eriksson, Ulf Hedin, Stefanie Dimmeler, Xintian You, Oliver Rossbach, Andreas Zeiher, Jes-Niels Boeckel, Yosif Manavski, Nicolas Jaé, Kimon Stamatelopoulos, Aikaterini Gatsiou, Ljubica Perisic, Carolin Amrhein
2015-11-01

Isoforms of RNA-Editing Enzyme ADAR1 Independently Control Nucleic Acid Sensor MDA5-Driven Autoimmunity and Multi-organ Development

Kathleen Pestal, Nathan D Price
2015-09-22

Joint modeling of RNase footprint sequencing profiles for genome-wide inference of RNA structure
2015-07-23

RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself

Carl R Walkley, Alistair M Chalk
2015-06-05

Aicardi-Goutières syndrome and the type I interferonopathies

Nicolas Manel, Yanick J. Crow
2015-03-18

Structural imprints in vivo decode RNA regulatory mechanisms

Ryan Flynn, Eric T. Kool
2015-03-18

hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1.

Alessandra Vigilante, Jernej Ule
2015-03-09

Genomic analysis of ADAR1 binding and its involvement in multiple RNA processing pathways

Mete Civelek, Xianzhi Lin, Jae-Hyung Lee, Xinshu Xiao
2015-04-23

GWIPS-viz as a tool for exploring ribosome profiling evidence supporting the synthesis of alternative proteoforms

Pavel Baranov
2015-01-23

Detecting riboSNitches with RNA folding algorithms: a genome-wide benchmark

Meredith Corley, Alain Laederach, Amanda Solem
2014-12-31

Global analysis of the RNA-protein interaction and RNA secondary structure landscapes of the Arabidopsis nucleus

Ian M Silverman, Andrew D. Nelson, Mark Beilstein
2014-11-13

The RNA-editing enzyme ADAR1 controls innate immune responses to RNA

Chris Ponting, Sarah L McGlasson, Christoffer Nellåker, Cornelia Vesely, Michael F Jantsch, Ian R. Adams, Marie Öhman, Mary A O'Connell
2014-01-01

Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome

Francesco Neri, Salvatore Oliviero
2014-08-27

A genome-wide map of hyper-edited RNA reveals numerous new sites

Hagit T Porath, Shai Carmi, Erez Y. Levanon
2014-02-03

Alu elements shape the primate transcriptome by cis-regulation of RNA editing

Marie Öhman
2014-01-01

Landscape and variation of RNA secondary structure across the human transcriptome

Eran Segal, Ryan Flynn
2014-01

RADAR: a rigorously annotated database of A-to-I RNA editing
2013-12-17

A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes

Jasmine Jacob-Hirsch, Rui Zhang, Erez Y. Levanon, Eli Eisenberg, Gidi Rechavi, Lily Bazak
2013-12-15

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo

Manolis Kellis, Jonathan Weissman
2013-10-31

ADAR regulates RNA editing, transcript stability, and gene expression

Xiaorong Wang
2013-05-16

Staufen-mediated mRNA decay

Lynne E. Maquat
2013-04-04

Genome-wide mapping of RNA structure using nuclease digestion and high-throughput sequencing
2013-03-08

Global regulation of alternative splicing by adenosine deaminase acting on RNA (ADAR).

Jasmine Jacob-Hirsch, Gidi Rechavi, Ninette Amariglio, Michal Safran, Karen Cesarkas, Eran Eyal, Naamit Deshet-Unger
2013-01-09

Regulation and dysregulation of 3'UTR-mediated translational control
2013-01-17

Structural basis for dsRNA recognition, filament formation, and antiviral signal activation by MDA5
2013-01

Darned in 2013: inclusion of model organisms and linking with Wikipedia

Anmol M Kiran, John J O'Mahony, Komal Sanjeev, Pavel Baranov

Article - wd:Q47158316

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