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Delta: a new Web-based 3D genome visualization and analysis platform.

published in: Bioinformatics

date of publication: 2017-12-15

language: English

Cites articles 20

Date

Title

Authors

2017-01-30

Chrom3D: three-dimensional genome modeling from Hi-C and nuclear lamin-genome contacts
2016-10-01

Organization and function of the 3D genome.

Boyan Bonev, Giacomo Cavalli
2016-07-01

Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom

Eric Lander, Jill P. Mesirov, Muhammad S Shamim, Erez Lieberman Aiden
2016-10-13

3Disease Browser: A Web server for integrating 3D genome and disease-associated chromosome rearrangement data
2016-09-01

Genome-wide mapping and analysis of chromosome architecture

Ming Hu
2016-05-16

3D-GNOME: an integrated web service for structural modeling of the 3D genome

Michał Kadlof, Dariusz Plewczynski
2016-01-22

Predicting DNA Methylation State of CpG Dinucleotide Using Genome Topological Features and Deep Networks
2016-05-03

FastHiC: a fast and accurate algorithm to detect long-range chromosomal interactions from Hi-C data

Ming Hu
2016-03-02

HSA: integrating multi-track Hi-C data for genome-scale reconstruction of 3D chromatin structure
2015-09-21

HiCPlotter integrates genomic data with interaction matrices

Lynda Chin
2015-12-10

CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription

Junhong Luo, PaweI Trzaskoma, Adriana Magalska, Jakub Włodarczyk, Grzegorz Wilczyński, Dariusz Plewczynski, Blazej Ruszczycki, Guoliang Li
2015-12-31

MOGEN: a tool for reconstructing 3D models of genomes from chromosomal conformation capturing data
2015-08-26

Identification of hierarchical chromatin domains

Caleb Weinreb
2014-09-16

Genome-wide map of regulatory interactions in the human genome
2014-02-07

HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization

Geir Kjetil Sandve, Sveinung Gundersen, Eivind Hovig
2014-10-23

Long noncoding RNAs: an emerging link between gene regulation and nuclear organization

Sofia Quinodoz
2013-01-31

Bayesian inference of spatial organizations of chromosomes

Ming Hu, Zhaohui Steve Qin
2013-05-01

Exploring long-range genome interactions using the WashU Epigenome Browser

Daofeng Li, Pamela A F Madden
2009-10-01

My5C: web tools for chromosome conformation capture studies

Amartya Sanyal, Job Dekker
2003-09-21

The beta-globin nuclear compartment in development and erythroid differentiation

Wouter de Laat

Article - wd:Q49668471

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