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Unidirectional peristaltic movement in multisite drug binding pockets of AcrB from molecular dynamics simulations.

著者

Youyong Li

Tingjun Hou

この作品が含まれる作品: Molecular BioSystems

出版日: 2012-10-01

main subject: binding pocket

Cites articles 41

Date

タイトル

著者

2012-03-29

Studies on the Interactions between β2 Adrenergic Receptor and Gs Protein by Molecular Dynamics Simulations

Youyong Li, Tingjun Hou
2011-06-09

Role of water during the extrusion of substrates by the efflux transporter AcrB.

Attilio V Vargiu, Paolo Ruggerone, Ulrich Kleinekathöfer
2011-10

Three ways in, one way out: water dynamics in the trans-membrane domains of the inner membrane translocase AcrB
2010-06

Functional rotation of the transporter AcrB: insights into drug extrusion from simulations

Attilio V Vargiu, Paolo Ruggerone, Ulrich Kleinekathöfer
2010-01-01

Computational modeling of structure-function of g protein-coupled receptors with applications for drug design
2010-01-01

Computational simulation of drug delivery at molecular level

Youyong Li, Tingjun Hou
2010-01-15

Predicted 3D structures for adenosine receptors bound to ligands: comparison to the crystal structure

Youyong Li, Bartosz Trzaskowski, Ravinder Abrol
2010-08-20

Substrate path in the AcrB multidrug efflux pump of Escherichia coli

Fasahath Husain
2009-04-28

The assembled structure of a complete tripartite bacterial multidrug efflux pump
2009-05-29

Crystal structure of the multidrug exporter MexB from Pseudomonas aeruginosa
2008-09-01

The AcrB efflux pump: conformational cycling and peristalsis lead to multidrug resistance

François Verrey, Lorenz Brandstätter, Kay Diederichs, André Schiefner
2008-10-03

Gating at both ends and breathing in the middle: conformational dynamics of TolC

Mark S.P. Sansom
2008-08-09

Multidrug efflux transporter, AcrB--the pumping mechanism

村上聡
2008-01-27

Engineered disulfide bonds support the functional rotation mechanism of multidrug efflux pump AcrB.

Christoph von Ballmoos, François Verrey, Lorenz Brandstätter, Kay Diederichs
2008-12-05

Covalently linked trimer of the AcrB multidrug efflux pump provides support for the functional rotating mechanism
2008-05-06

Protons and how they are transported by proton pumps

Poul Nissen, Bjørn Panyella Pedersen, Michael Broberg Palmgren
2007-01

Drug export pathway of multidrug exporter AcrB revealed by DARPin inhibitors
2007-08-11

Prediction of the 3D structure and dynamics of human DP G-protein coupled receptor bound to an agonist and an antagonist

Youyong Li, Nagarajan Vaidehi
2006-01-01

Virulence and drug resistance roles of multidrug efflux systems of Salmonella enterica serovar Typhimurium.

Kunihiko Nishino
2006-03-01

Conformational flexibility in the multidrug efflux system protein AcrA.
2006-08-16

Crystal structures of a multidrug transporter reveal a functionally rotating mechanism.

村上聡, Eiki Yamashita
2006-01-01

Dynamics of the trimeric AcrB transporter protein inferred from a B-factor analysis of the crystal structure

Kai-Ming Ho, Cai-Zhuang Wang, Wen-Cai Lu
2006-09-01

Structural asymmetry of AcrB trimer suggests a peristaltic pump mechanism.

Francois Verrey
2006-07-14

Chance and design--proton transfer in water, channels and bioenergetic proteins
2006-08

Et tu, Grotthuss! and other unfinished stories
2006-09-01

Proton transfer 200 years after von Grotthuss: insights from ab initio simulations
2004-05-20

AcrA, AcrB, and TolC of Escherichia coli Form a Stable Intermembrane Multidrug Efflux Complex
2004-03

VEGA – An open platform to develop chemo-bio-informatics applications, using plug-in architecture and script programming

Giulio Vistoli, Alessandro Pedretti
2002-10-10

Crystal structure of bacterial multidrug efflux transporter AcrB

村上聡, Eiki Yamashita
2001-10-01

Analysis of a complete library of putative drug transporter genes in Escherichia coli
2001-04-01

Antibiotic susceptibility profiles of Escherichia coli strains lacking multidrug efflux pump genes
2000-06-22

Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export

Vassilis Koronakis

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