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Constrained vertebrate evolution by pleiotropic genes

author

Haiyang Hu

2000 -

Masahiro Uesaka

Tsai-Ming Lu

Jr-Kai Yu

Takehiro Kusakabe

2000 -

Naoki Irie

2000 -

Philipp Khaitovich

1973 -

Guojie Zhang

published in: Nature Ecology and Evolution

date of publication: 2017-09-25

main subject: pleiotropy

Cites articles 55

Date

Title

Authors

2017-05-06

Remaining questions related to the hourglass model in vertebrate evolution

Naoki Irie
2017-02-06

Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features

Qi Zhou, Naoki Irie, Marcus Thomas Pius Gilbert, Guojie Zhang
2017-02-09

Pairwise comparisons across species are problematic when analyzing functional genomic data

Stefan Siebert, Catriona Munro, Felipe Zapata, Andreas Hejnol
2016-02-17

The mid-developmental transition and the evolution of animal body plans

Oleg Simakov, Mark Q Martindale, Leon Anavy, David H Silver, Selene L Fernandez-Valverde, Alison G. Cole, Joseph F Ryan, Itai Yanai, Detlev Arendt, Jochen C Rink
2016-04-18

Evolution by gene loss

Cristian Cañestro, Ricard Albalat
2016-05-01

Animal Evolution: Are Phyla Real?

Andreas Hejnol, Casey W. Dunn
2016-10-04

High expression of new genes in trochophore enlightening the ontogeny and evolution of trochozoans

Tomislav Domazet-Lošo, Thomas L Dunwell, Xiaodong Fang
2015-02-27

A "developmental hourglass" in fungi

Jerome Hui, Hoi Shan Kwan
2015-04-01

Facts and fancies about early fossil chordates and vertebrates

Philippe Janvier
2015-04-10

What to compare and how: Comparative transcriptomics for Evo-Devo

Marc Robinson-Rechavi, Julien Roux
2015-12-04

Constraints Evolve: Context Dependency of Gene Effects Allows Evolution of Pleiotropy

James Cheverud
2015-01

Gene Ontology Consortium: going forward

Emma Hatton-Ellis, Paul Lloyd, Antonia Lock, Penelope Garmiri, Ramona Britto, Maxim Scheremetjew, Mark D McDowall, Elena Cibrián Uhalte, Catherine Rivoire, Amaia Sangrador, Paul G Gane, Emmanuel Boutet, Elisabeth Coudert, Nancy H Campbell, Diane Inglis, Prudence Mutowo, Klemens Pichler, Benoit Bely, Stacia Engel, Michael Tognolli, Janos Demeter, Daniel M Staines, Deborah A Siegele, David Osumi-Sutherland, Lionel Breuza, Ivo Pedruzzi, Tanya Z Berardini, Anne Estreicher, Midori A Harris, Eva Huala, Rebecca E. Foulger, Paul Denny, Michele Magrane, Paola Roncaglia, Susan Tweedie, Sylvain Poux, Marcus C. Chibucos, Jane Lomax, Cecilia Arighi, Ruth Lovering, Paul D Thomas, Joanna Argasinska, Valerie Wood, Alan J Bridge, Rachael Huntley, Kim Rutherford, Claire O'Donovan, Lisa Matthews, Paul J. Kersey, Nicholas H Brown, Maria-Jesus Martin, Robert D. Finn, Helen Parkinson, Philippa Talmud, Jurg Bahler, Alex Bateman, Peter D'Eustachio
2014-12-01

The developmental hourglass model: a predictor of the basic body plan?

Shigeru Kuratani, Naoki Irie
2014-03-24

Genomics, evolution and development of amphioxus and tunicates: The Goldilocks principle
2014-06-03

Gene pleiotropy constrains gene expression changes in fish adapted to different thermal conditions

Craig Primmer, Spiros Papakostas, Leif Asbjørn Vøllestad, Matthieu Bruneaux, Tutku Aykanat, Joost Vanoverbeke, Erica H Leder
2014-11-07

Chordate evolution and the three-phylum system

Daniel S. Rokhsar
2014-04-07

Comparative epigenomics in distantly related teleost species identifies conserved cis-regulatory nodes active during the vertebrate phylotypic period

Joachim Wittbrodt, José Luis Gómez-Skarmeta, Juan J Tena, Cristina González-Aguilera, Javier Vázquez-Marín, Jaime J Carvajal, Juan R Martínez-Morales
2014-07-01

Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data

Jingyi Jessica Li, Steven E. Brenner, Peter J. Bickel
2013-04-25

The hourglass and the early conservation models--co-existing patterns of developmental constraints in vertebrates

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2013-06

The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan

Jun Wang, Kathryn Beal, Paul Flicek, Amonida Zadissa, Junyi Wang, Juan Pascual-Anaya, Qiye Li, Bronwen Aken, Javier Herrero, Guojie Zhang, Shigeru Kuratani, Naoki Irie, Shigehiro Kuraku, Simon White, Miguel Pignatelli, Steve Searle
2013-04-17

Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity

Yohei Sasagawa, Tetsutaro Hayashi, Itoshi Nikaido, Takeshi Imai, Hiroki R Ueda
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From mouse to human: evolutionary genomics analysis of human orthologs of essential genes

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The evolution of early animal embryos: conservation or divergence?

Pavel Tomancak
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A transcriptomic hourglass in plant embryogenesis
2012-05-03

Developmental milestones punctuate gene expression in the Caenorhabditis embryo

Itai Yanai, Michal Levin, Florian Wagner
2012-03-03

A model of developmental evolution: selection, pleiotropy and compensation

Mihaela Pavličev, Gunter P Wagner
2012-03-04

Fast gapped-read alignment with Bowtie 2

Steven Salzberg, Ben Langmead
2011-11-25

The Cambrian conundrum: early divergence and later ecological success in the early history of animals

Davide Pisani, Douglas Erwin, Erik A Sperling
2011-01-01

Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

Naoki Irie, Shigeru Kuratani
2011-04-01

Mapping gene expression in two Xenopus species: evolutionary constraints and developmental flexibility

Itai Yanai, Leonid Peshkin
2011-03-01

The pleiotropic structure of the genotype-phenotype map: the evolvability of complex organisms

Gunter P Wagner
2011-08-08

Multiple enhancers ensure precision of gap gene-expression patterns in the Drosophila embryo

Michael W Perry

Article - wd:Q57987447

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