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Diverse and variable virus communities in wild plant populations revealed by metagenomic tools

author

Philippe Roumagnac

Anna-Liisa Laine

1975 -

published in: PeerJ

date of publication: 2019

language: English

main subject: Betapartitivirus, Caulimovirus, Closterovirus, Enamovirus, Plantago lanceolata latent virus, small RNA, metagenomics, plant population

Cites articles 53

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In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana

Sébastien Carrere, Roux Fabrice
2017-03-10

Genome sequences of a capulavirus infecting Plantago lanceolata in the Åland archipelago of Finland

Anna-Liisa Laine, Kata Farkas, Philippe Roumagnac
2017-04-21

The evolution of parasitic and mutualistic plant-virus symbioses through transmission-virulence trade-offs

Frank M. Hilker
2017-05-15

Mycoviruses of an endophytic fungus can replicate in plant cells: evolutionary implications

Luca Nerva, Massimo Turina
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Environmental heterogeneity and the evolution of plant-virus interactions: Viruses in wild pepper populations

Aurora Fraile, Daniel Piñero
2017-06-27

Host resistance and pathogen aggressiveness are key determinants of coinfection in the wild

Hanna Susi, Anna-Liisa Laine
2017-10-20

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale

Gordon William Harkins, Philippe Ortet, Arvind Varsani, Philippe Roumagnac, Carolyn M Malmstrom
2017-11-14

Increase in taxonomic assignment efficiency of viral reads in metagenomic studies

Rémy Froissart, Philippe Roumagnac
2017-11-14

Ecological Factors Affecting Infection Risk and Population Genetic Diversity of a Novel Potyvirus in Its Native Wild Ecosystem
2016-07

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
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A Multiscale Approach to Plant Disease Using the Metacommunity Concept

Anna-Liisa Laine, Elizabeth T. Borer, Eric W. Seabloom
2016-08-21

RNA-Seq reveals virus-virus and virus-plant interactions in nature

Mari Kamitani
2016-09-14

The Plant Microbiota: Systems-Level Insights and Perspectives

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Microbes in the Anthropocene: spillover of agriculturally selected bacteria and their impact on natural ecosystems

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Structure and function of the bacterial root microbiota in wild and domesticated barley

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2015-03-05

Crop pathogen emergence and evolution in agro-ecological landscapes

Peter H Thrall, Jeremy J. Burdon
2015-06

Plant Virus Metagenomics: Advances in Virus Discovery

Philippe Roumagnac, Marilyn J Roossinck
2015-09

Alfalfa Leaf Curl Virus: an Aphid-Transmitted Geminivirus

Philippe Roumagnac, Stéphane Blanc, François Mesléard
2015-09-04

Why infectious disease research needs community ecology

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Evolutionary and Epidemiological Implications of Multiple Infection in Plants

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Article - wd:Q60912138

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