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Systematic assessment of commercially available low-input miRNA library preparation kits

författare

Fatima Heinicke

Xiangfu Zhong

Manuela Zucknick

Johannes Breidenbach

Magnus Leithaug

Simon Rayner

Benedicte A Lie

1971 -

Gregor D Gilfillan

publicerad i: RNA Biology

utgivningsår: 2019-09-27

Refererar artiklar 47

Datum

Titel

Författare

2019-06-03

A comparison of RNA extraction and sequencing protocols for detection of small RNAs in plasma.

David A. Simpson
2019-06-21

Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods
2018-02-05

Systematic comparison of small RNA library preparation protocols for next-generation sequencing

Karine Alix, Erwin van Dijk
2018-07-13

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers.

Phillip D. Zamore
2018-07-16

Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling

Maria D Giraldez, Ryan M Spengler, Tom A P Driedonks, Esther N M Nolte-'t Hoen, Hui Jiang, Louise C Laurent, David J Erle, Prescott G. Woodruff
2018-09-18

Evaluation of methodologies for microRNA biomarker detection by next generation sequencing

Anna Maria Lara Coenen-stass, Iddo Z Ben-Dov
2017-09-01

UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
2017-11-01

Incorporation of unique molecular identifiers in TruSeq adapters improves the accuracy of quantitative sequencing
2016-03-31

A Guideline of Selecting and Reporting Intraclass Correlation Coefficients for Reliability Research

Terry K Koo
2016-11-22

Small RNA Library Preparation Method for Next-Generation Sequencing Using Chemical Modifications to Prevent Adapter Dimer Formation

Sabrina Shore
2016-01-28

The role of MicroRNAs in human cancer

Yong Peng
2015-05-05

Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structure
2014-01

miRBase: annotating high confidence microRNAs using deep sequencing data

Sam Griffiths-Jones
2014-09-01

Increased miR-223 expression in T cells from patients with rheumatoid arthritis leads to decreased insulin-like growth factor-1-mediated interleukin-10 production
2014-06-29

Evaluation of quantitative miRNA expression platforms in the microRNA quality control (miRQC) study.

Jo Vandesompele, Ditte Andreasen
2014-01-01

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I Love, Wolfgang Huber, Simon Anders
2013-07-18

Comprehensive microRNA analysis identifies miR-24 and miR-125a-5p as plasma biomarkers for rheumatoid arthritis
2012-01-12

Structural bias in T4 RNA ligase-mediated 3'-adapter ligation
2012-05-05

Identification of microRNA-221/222 and microRNA-323-3p association with rheumatoid arthritis via predictions using the human tumour necrosis factor transgenic mouse model

Martin Reczko, Giorgos Kollias, Ioannis Pandis, Caroline Ospelt
2012-05-30

Reducing ligation bias of small RNAs in libraries for next generation sequencing

Sam Griffiths-Jones, Helio Pais, Tamas Dalmay
2012-08-19

Overexpression of microRNA-223 in rheumatoid arthritis synovium controls osteoclast differentiation
2011-07-20

RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries

Markus Hafner, Thomas Tuschl
2011-09-02

Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing

Anitha Jayaprakash
2010-01-01

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Davis J McCarthy, Mark D. Robinson, Gordon K Smyth
2010-02-01

Physiological and pathological roles for microRNAs in the immune system

Dinesh S Rao, David Baltimore
2010-03-12

The role of microRNA in rheumatoid arthritis and other autoimmune diseases
2009-01-01

MicroRNA control in the immune system: basic principles

Klaus Rajewsky
2009-02-01

MicroRNAs: key regulators of stem cells
2009

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Mihai Pop, Steven Salzberg, Ben Langmead, Cole Trapnell
2009-07-01

Limitations and possibilities of small RNA digital gene expression profiling.

Georges E Janssens, Elzo de Wit
2009-09-10

RNAi in budding yeast

Kenneth H. Wolfe, Kathleen T Xie, David Bartel
2009-11-18

miR-223 is overexpressed in T-lymphocytes of patients affected by rheumatoid arthritis

Mauro Galeazzi

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