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Geneshot: search engine for ranking genes from arbitrary text queries

autore

Avi Ma'ayan

2000 -

Alexander Lachmann

pubblicato in: Nucleic Acids Research

data di pubblicazione: 2019-07-01

Cita articoli 24

Data

Titolo

Autori

2019-03-08

Design, implementation, and operation of a rapid, robust named entity recognition web service

Sune Pletscher-Frankild, Lars Juhl Jensen
2019-01-01

Open Targets Platform: new developments and updates two years on

Denise Carvalho Silva, Chuang Kee Ong, Nikiforos Karamanis, Adam Faulconbridge, Andrew Hercules, Gareth Peat, Michaela Spitzer, David G Hulcoop, Ian Dunham, Miguel Pignatelli, Gautier Koscielny
2018-12-29

Mining data and metadata from the gene expression omnibus

Zichen Wang, Avi Ma'ayan, Alexander Lachmann
2018-11-22

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets

Annika L Gable, David Lyon, Nadezhda Tsankova Doncheva, John "Scooter" Morris, Peer Bork, Lars Juhl Jensen, Damian Szklarczyk, Alexander Junge, Stefan Wyder, Jaime Huerta-Cepas, Christian von Mering, Milan Simonovic
2018-04-10

Massive mining of publicly available RNA-seq data from human and mouse.

Avi Ma'ayan, Moshe C Silverstein, Alexander Lachmann, Kathleen M. Jagodnik
2018-03-23

Unexplored therapeutic opportunities in the human genome

Anna Gaulton, Shawn M. Gomez, Anne Hersey, Ajit Jadhav, Andrew Leach, Avi Ma'ayan, Anna Malovannaya, Terrence F Meehan, Christian von Mering, Daniel Muthas, Dac-Trung Nguyen, George Papadatos, Anton Simeonov, Søren Brunak, Lars Juhl Jensen, Larry Sklar, Stephan C Schürer, Noel Southall, Tudor I. Oprea, Cristian G. Bologa, John P. Overington, David Westergaard, Jayme Holmes, Subramani Mani, Oleg Ursu, Gregory N Gan, Anneli Karlson, Bryan L. Roth, Dušica Vidovic, Gergely Zahoránszky-Köhalmi, Michael McManus
2017-06-16

MyGeneFriends: A Social Network Linking Genes, Genetic Diseases, and Researchers

Alexis Allot, Kirsley Chennen, Yannis Nevers, Laetitia Poidevin, Arnaud Kress, Raymond Ripp, Julie D Thompson, Olivier Poch, Odile Lecompte
2016-11-29

Pharos: Collating protein information to shed light on the druggable genome

Søren Brunak, John P. Overington, Dac-Trung Nguyen, Anna Gaulton, Anne Hersey, Lars Juhl Jensen, Avi Ma'ayan, Saurabh Mehta, Andrew D Rouillard, Ajit Jadhav, Larry Sklar, Stephan C Schürer, Noel Southall, Tudor I. Oprea, Cristian G. Bologa, Jayme Holmes, Subramani Mani, Oleg Ursu
2016-07-03

The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins

Andrew D Rouillard, Zichen Wang, Avi Ma'ayan
2016-05-03

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

Andrew D Rouillard, Zichen Wang, Simon Koplev, Avi Ma'ayan, Alexander Lachmann, Sherry L Jenkins, Kathleen M. Jagodnik
2015-06-06

Dynamics of the discovery process of protein-protein interactions from low content studies

Zichen Wang, Avi Ma'ayan
2015-05-19

PALM-IST: Pathway Assembly from Literature Mining--an Information Search Tool
2014-09-18

circBase: a database for circular RNAs

Panagiotis Papavasileiou, Nikolaus Rajewsky
2013-04-15

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

Gabriela Vaz Meirelles, Zichen Wang, Avi Ma'ayan
2013-01

NCBI GEO: archive for functional genomics data sets--update

Tanya Barrett, Sean Davis
2012-12-17

GLAD4U: deriving and prioritizing gene lists from PubMed literature
2011-12-01

D³: Data-Driven Documents
2011-01

Entrez Gene: gene-centered information at NCBI

Tatiana Tatusova, Kim D. Pruitt, Donna R. Maglott
2009-01-14

BioMart--biological queries made easy

Benoit Ballester, Richard Holland, Gudmundur Thorisson, Arek Kasprzyk, Damian Smedley
2008-11-01

FACTA: a text search engine for finding associated biomedical concepts

Sophia Ananiadou, Jun'ichi Tsujii, Yoshimasa Tsuruoka
2006-02

Literature mining for the biologist: from information retrieval to biological discovery

Lars Juhl Jensen, Peer Bork, Jasmin Saric
2005-09-30

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

Eric Lander, Jill P. Mesirov, Sayan Mukherjee, Todd Golub, Pablo Tamayo, Benjamin L. Ebert, Scott L Pomeroy
2001-10-24

The HUGO Gene Nomenclature Committee (HGNC).

Elspeth A Bruford
2000-01-01

KEGG: kyoto encyclopedia of genes and genomes

Articolo - wd:Q92202951

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