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Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii

author

Natalia N. Ivanova

Nikos C. Kyrpides

1963 -

Alla Lapidus

Philip Hugenholtz

Bharat Patel

Iain J. Anderson

Konstantinos Mavromatis

Athanasios Lykidis

Sean D. Hooper

Victor Kunin

published in: PLOS One

date of publication: 2009-01-15

language: English

Cites articles 34

Date

Title

Authors

2008-04

The Structure of Sucrose Phosphate Synthase from Halothermothrix orenii Reveals Its Mechanism of Action and Binding Mode

Janusz Bujnicki
2008-02-29

Crystal structure of the polyextremophilic alpha-amylase AmyB from Halothermothrix orenii: details of a productive enzyme-substrate complex and an N domain with a role in binding raw starch

Bharat Patel, Christina Divne
2008-01

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

Nektarios Tavernarakis, Nikos C. Kyrpides, Konstantinos Mavromatis, Konstantinos Liolios
2007-10-12

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

Natalia N. Ivanova, Nikos C. Kyrpides, Iain J. Anderson, Konstantinos Mavromatis, Krishna Palaniappan, Victor Markowitz, Ernest Szeto, Athanasios Lykidis, Yuri Grechkin, Inna Dubchak
2007

Evolutionary conservation of sequence and secondary structures in CRISPR repeats

Philip Hugenholtz, Victor Kunin
2007-04-01

Proteins from extremophiles as stable tools for advanced biotechnological applications of high social interest

Mosè Rossi
2006-10-01

Regulatory loop between redox sensing of the NADH/NAD(+) ratio by Rex (YdiH) and oxidation of NADH by NADH dehydrogenase Ndh in Bacillus subtilis
2006-09-22

Functional analysis of the twin-arginine translocation pathway in Corynebacterium glutamicum ATCC 13869.
2006-11-01

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis
2006-06-01

The catalase and superoxide dismutase genes are transcriptionally up-regulated upon oxidative stress in the strictly anaerobic archaeon Methanosarcina barkeri
2006-05-15

New opportunities revealed by biotechnological explorations of extremophiles

Mircea Podar, Anna-Louise Reysenbach
2006-03-01

Toward automatic reconstruction of a highly resolved tree of life

Francesca D Ciccarelli, Christian von Mering, Christopher J. Creevey, Berend Snel, Peer Bork, Tobias Doerks
2006-04-19

Crystal structure of AmyA lacks acidic surface and provide insights into protein stability at poly-extreme condition
2005-12-01

A comparative genomic view of clostridial sporulation and physiology
2005-01-01

Rfam: annotating non-coding RNAs in complete genomes

Alex Bateman, Sean Eddy, Sam Griffiths-Jones, Mhairi Marshall, Simon Moxon
2004-12-24

Expression, purification and preliminary crystallographic analysis of sucrose phosphate synthase (SPS) from Halothermothrix orenii

Bharat Patel
2004

Genomic and proteomic adaptations to growth at high temperature
2004-08-01

Coupling of the pathway of sulphur oxidation to dioxygen reduction: characterization of a novel membrane-bound thiosulphate:quinone oxidoreductase

Tiago M. Bandeiras, Arnulf Kletzin, Tim Urich, Cláudio M. Gomes, Miguel Teixeira
2004-07-16

Improved prediction of signal peptides: SignalP 3.0

Søren Brunak, Henrik Nielsen, Jannick Dyrløv Bendtsen, Gunnar von Heijne
2004

MUSCLE: multiple sequence alignment with high accuracy and high throughput
2004-02-25

ARB: a software environment for sequence data

Arno Buchner
2003-02-04

The genome sequence of Clostridium tetani, the causative agent of tetanus disease

Heiko Liesegang, Gerhard Gottschalk, Rainer Merkl, Christina Herzberg, Christina Herzberg, Arnim Wiezer, Wolfgang Florian Fricke, Rosa Martinez-Arias, Anke Henne
2002-08-01

Cloning, sequencing and expression of an alpha-amylase gene, amyA, from the thermophilic halophile Halothermothrix orenii and purification and biochemical characterization of the recombinant enzyme
2002-03

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

Martin Vingron
2002-04-01

Sucrose metabolism: Anabaena sucrose-phosphate synthase and sucrose-phosphate phosphatase define minimal functional domains shuffled during evolution

Andrea C. Cumino
2001-11-01

Two essential DNA polymerases at the bacterial replication fork

Claude Bruand, Jeff Errington
2001-09-15

Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution
2001-02-01

Random sequence analysis of genomic DNA of an anaerobic, thermophilic, halophilic bacterium, Halothermothrix orenii
2001-01-01

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

Anders Krogh, Gunnar von Heijne, Erik Sonnhammer
1999-05-01

Cloning and expression of a prokaryotic sucrose-phosphate synthase gene from the cyanobacterium Synechocystis sp. PCC 6803.

John E. Lunn
1995-12-01

Reevaluating the classification of Halobacteroides and Haloanaerobacter species based on sequence comparisons of the 16S ribosomal RNA gene

Kathy Andrews
1994-09-01

Osmoregulation in Bacillus subtilis: synthesis of the osmoprotectant glycine betaine from exogenously provided choline

Article - wd:Q33399965

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