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Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop

published in: Structure

date of publication: 2015-06-18

main subject: workshop

Cites articles 76

Date

Title

Authors

2015-02-26

Advanced ensemble modelling of flexible macromolecules using X-ray solution scattering

Giancarlo TRIA
2015-03-23

Conjoined use of EM and NMR in RNA structure refinement

Charles D Schwieters
2015-03-18

Hybrid methods for macromolecular structure determination: experiment with expectations

Gunnar F. Schröder
2015-02

Conformational changes during pore formation by the perforin-related protein pleurotolysin

Irene Farabella, Ruby H Law, Cyril F Reboul, Daouda A Traore, Joseph A Trapani, Tamas Hatfaludi, James C Whisstock, Maya Topf, Helen Saibil
2014-01-01

Highly Scalable and Memory Efficient Ultra-Coarse-Grained Molecular Dynamics Simulations

Gregory A. Voth
2014-10-28

SASBDB, a repository for biological small-angle scattering data

Dmitri Svergun, Erica Valentini, Cy M Jeffries
2014-10

Uncertainty in integrative structural modeling

Dina Schneidman-Duhovny, Andrej Šali
2014-08-26

Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.

Michael P Rout, Andrej Šali, Dina Schneidman-Duhovny, Elina Tjioe, Seung Joong Kim
2014-08-13

High-speed AFM imaging
2014-07-31

Cys-scanning disulfide crosslinking and bayesian modeling probe the transmembrane signaling mechanism of the histidine kinase, PhoQ.

Andrej Šali, William DeGrado
2014-07-09

The National Institutes of Health's Big Data to Knowledge (BD2K) initiative: capitalizing on biomedical big data

Jennie E Larkin, Ronald N Margolis, Eric D. Green
2014-02-09

A mass spectrometry-based hybrid method for structural modeling of protein complexes

Ruedi Aebersold, Florian Stengel, Alexander Leitner, Carol V. Robinson, Thomas Walzthoeni
2014-01-13

Integrated description of protein dynamics from room-temperature X-ray crystallography and NMR

Henry van den Bedem, Robert Fenwick, James S Fraser, Peter Wright
2014-01-13

Insight into cyanobacterial circadian timing from structural details of the KaiB-KaiC interaction

Anika Wiegard, Alexandre Bonvin, Ilka M Axmann, Albert J.R. Heck, Adrien S.J. Melquiond
2014-02-01

The expanded FindCore method for identification of a core atom set for assessment of protein structure prediction.

Gaetano T. Montelione
2014-09-12

Architecture of the Saccharomyces cerevisiae SAGA transcription coactivator complex

Yan Han, Jie Luo, Steven Hahn
2013-12

Energy barriers and driving forces in tRNA translocation through the ribosome

Helmut Grubmüller, Niels Fischer, Lars V Bock, Andrea C Vaiana, Gunnar F. Schröder, Marina Rodnina
2013-10-30

Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution

Rodolfo Ghirlando, Charles D Schwieters, G. Marius Clore
2013-09-03

Recommendations of the wwPDB NMR Validation Task Force

Jane Shelby Richardson, Helen M. Berman, Gaetano T. Montelione, Peter Güntert, Torsten Herrmann, Michael Nilges, Wim F. Vranken, Gerard Kleywegt, David Wishart, Charles D Schwieters, John Markley, Geerten W Vuister, Ad Bax
2013-08-04

Molecular assembly of the aerolysin pore reveals a swirling membrane-insertion mechanism

Henning Stahlberg, Matteo T. Degiacomi, Mikhail Kudryashev, Françoise Gisou van der Goot
2013-06-01

Report of the wwPDB Small-Angle Scattering Task Force: data requirements for biomolecular modeling and the PDB.

Gerard Kleywegt, Andrej Šali, John Westbrook, Torsten Schwede, Jill Trewhella, Dmitri Svergun, Helen M. Berman, John A. Tainer
2013

The Protein Model Portal--a comprehensive resource for protein structure and model information

Torsten Schwede, Lorenza Bordoli, Konstantin Arnold
2013-02-01

Biochemistry. Integrative structural biology

Andrej Šali, Andrew B Ward
2013-03-26

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers

Juri Rappsilber, Lutz Fischer, Zhuo A Chen
2013-07-01

Macromolecular symmetric assembly prediction using swarm intelligence dynamic modeling.

Matteo T. Degiacomi
2012-11-23

Structural basis of transcription initiation

Eddy Arnold, Yu Zhang, Richard H. Ebright
2012-07-03

Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples

Gaetano T. Montelione, David Baker, Paolo Rossi
2012-06-14

Atomic model of the type III secretion system needle

Karin Giller, Christian Griesinger, Antoine Loquet, David Baker
2012-05-17

Publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution

David A. Jacques, Mitchell Guss, Dmitri Svergun, Jill Trewhella
2012-02-08

Outcome of the first electron microscopy validation task force meeting

Helen M. Berman, Richard Henderson, Joachim Frank, Andrej Šali, John Westbrook, Batsal Devkota, Gunnar F. Schröder, Bridget Carragher, Gerard Kleywegt, Edward H Egelman, Catherine L. Lawson, Jasmine Young, Zukang Feng, Wah Chiu, Huanwang Yang, Nikolaus Grigorieff, Pawel A Penczek, Michael Rossmann, Willy Wriggers, Steven J. Ludtke
2012-01

Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies

Andrej Šali, Dina Schneidman-Duhovny, Ben S. Webb, Javier A Velázquez-Muriel, Elina Tjioe
2012-11-11

A toolkit and benchmark study for FRET-restrained high-precision structural modeling

Roger S. Goody, Thomas Peulen, Claus Seidel

Article - wd:Q37066138

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