Vincent Gardeux

1983 -

formació a: Universitat París-Est-Créteil-Val-de-Marne, CY Tech

ocupació: investigador

lloc web oficial: gardeux-vincent.eu

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Articles 26

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2022-04-19

A leukemia-protective germline variant mediates chromatin module formation via transcription factor nucleation

Gerard Llimos, Vincent Gardeux, Judith F Kribelbauer, Daniel Alpern, Joern Pezoldt, Maria Litovchenko, Gianluca Gaidano, Christoph Plass, Pavlo Lutsik, Alistair N Boettiger, Freddy Radtke, Bart Deplancke
2021-03-29

Disparate temperature-dependent virus-host dynamics for SARS-CoV-2 and SARS-CoV in the human respiratory epithelium

Philip V'kovski, Jenna N Kelly, Bastien Mangeat, Melle Holwerda, Rune Hartmann, Vincent Gardeux, Daniel Alpern, Bart Deplancke, Volker Thiel, Ronald Dijkman
2020-04-28

Disparate temperature-dependent virus – host dynamics for SARS-CoV-2 and SARS-CoV in the human respiratory epithelium

Philip V'kovski, Bastien Mangeat, Joern Pezoldt, Melle Holwerda, Annika Kratzel, Rune Hartmann, Vincent Gardeux, Bart Deplancke, Volker Thiel, Ronald Dijkman
2020-05-27

A parallelized, automated platform enabling individual or sequential ChIP of histone marks and transcription factors

Vincent Gardeux, Gerard Llimos, Daniel Alpern, Bart Deplancke
2019-04-19

BRB-seq: ultra-affordable high-throughput transcriptomics enabled by bulk RNA barcoding and sequencing

Vincent Gardeux, Bastien Mangeat, Antonio Meireles-filho
2019-12-03

Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle

Elias T Friman, Antonio Meireles-filho, Vincent Gardeux, Bart Deplancke, David Suter
2019-11-01

Sex-dependent and sex-independent regulatory systems of size variation in natural populations

Hirokazu Okada, Ryohei Yagi, Vincent Gardeux, Bart Deplancke, Ernst Hafen
2017-05-24

N-of-1-pathways MixEnrich: advancing precision medicine via single-subject analysis in discovering dynamic changes of transcriptomes

Haiquan Li, Vincent Gardeux, Joanne Berghout, Yves A. Lussier, A. Grant Schissler, Ikbel Achour, Colleen Kenost
2017-10-01

ASAP: a Web-based platform for the analysis and interactive visualization of single-cell RNA-seq data

Vincent Gardeux, Petra C Schwalie
2017-02-09

Dissecting the brown adipogenic regulatory network using integrative genomics

Rachana N Pradhan, Vincent Gardeux, Daniel Alpern, Wanze Chen, Bart Deplancke, Petra C Schwalie
2017-11-01

A genome-by-environment interaction classifier for precision medicine: personal transcriptome response to rhinovirus identifies children prone to asthma exacerbations

Haiquan Li, Vincent Gardeux, Joanne Berghout, Yves A. Lussier, A. Grant Schissler, Ikbel Achour, Colleen Kenost, Anthony Bosco, Marilyn Halonen
2017-09-08

Profiling of Single-Cell Transcriptomes

Antonio Meireles-filho, Wanze Chen, Vincent Gardeux
2016-04-27

Integrative genomics analyses unveil downstream biological effectors of disease-specific polymorphisms buried in intergenic regions

Haiquan Li, Vincent Gardeux, Lorenzo L Pesce, Yves A. Lussier, Lisa Bastarache, Joshua C. Denny, Ikbel Achour
2016-07-01

The Genetics of Transcription Factor DNA Binding Variation

Bart Deplancke, Daniel Alpern, Vincent Gardeux
2016-12-19

kMEn: Analyzing noisy and bidirectional transcriptional pathway responses in single subjects

Yves A. Lussier, Vincent Gardeux, Haiquan Li, Joanne Berghout, A. Grant Schissler, Ikbel Achour, Colleen Kenost
2015-01-15

Are we able to predict survival in ER-positive HER2-negative breast cancer? A comparison of web-based models

Vincent Gardeux, Roman Rouzier
2015-06-01

Dynamic changes of RNA-sequencing expression for precision medicine: N-of-1-pathways Mahalanobis distance within pathways of single subjects predicts breast cancer survival

Vincent Gardeux, Haiquan Li, Walter W. Piegorsch, Yves A. Lussier, A. Grant Schissler, Ikbel Achour
2015-03-19

Towards a PBMC "virogram assay" for precision medicine: Concordance between ex vivo and in vivo viral infection transcriptomes

Vincent Gardeux, Yves A. Lussier, Anthony Bosco, Marilyn Halonen
2015-10-30

eQTL networks unveil enriched mRNA master integrators downstream of complex disease-associated SNPs

Vincent Gardeux, Yves A. Lussier, Ikbel Achour
2015-04-19

Computing molecular signatures as optima of a bi-objective function: method and application to prediction in oncogenomics

Vincent Gardeux, Rachid Chelouah, Roman Rouzier, Fabien Reyal
2014-02-03

ARTS: automated randomization of multiple traits for study design

Vincent Gardeux, Ankit A Desai, Yves A. Lussier, Neil Bahroos, Mark G Maienschein-Cline
2014-05-08

Concordance of deregulated mechanisms unveiled in underpowered experiments: PTBP1 knockdown case study

Vincent Gardeux, Yves A. Lussier, Ikbel Achour
2014-06-12

'N-of-1-pathways' unveils personal deregulated mechanisms from a single pair of RNA-Seq samples: towards precision medicine

Vincent Gardeux, Lorenzo L Pesce, Yves A. Lussier, Ikbel Achour, Neil Bahroos, Mark G Maienschein-Cline, Joe G N Garcia
2014-05-08

In Silico cancer cell versus stroma cellularity index computed from species-specific human and mouse transcriptome of xenograft models: towards accurate stroma targeting therapy assessment

Xinan Yang, Vincent Gardeux, Haiquan Li, Yves A. Lussier, Ikbel Achour, Ellen Rebman
2014-11-14

COPD Hospitalization Risk Increased with Distinct Patterns of Multiple Systems Comorbidities Unveiled by Network Modeling

Vincent Gardeux, Yves A. Lussier, Andrew D. Boyd, Colleen Kenost, Jianrong John Li
2013

The discriminatory cost of ICD-10-CM transition between clinical specialties: metrics, case study, and mitigating tools

Vincent Gardeux, Andrew D. Boyd, Yves A. Lussier, Ikbel Achour, Jianrong John Li, Neil Bahroos

Human - wd:Q42320767

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