Ludovic Cottret

uczył się w: Université de Rouen

zajęcie: badacz

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Artykuły 36

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2020-03-02

An ancestral signalling pathway is conserved in intracellular symbioses-forming plant lineages

Guru Radhakrishnan, Jean Keller, Tatiana Vernié, Ludovic Cottret, Hélène San Clemente, Cyril Libourel, Magnus Eklund, Gane Ka-Shu Wong, Fay-Wei Li, Giles Oldroyd, Pierre-Marc Delaux, Ulf Lagercrantz
2020-03-31

Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth

Ludovic Cottret, Stéphane Genin, Caroline Baroukh, Marie-Agnès Jacques
2020-08-15

EffectorK, a comprehensive resource to mine for Ralstonia, Xanthomonas, and other published effector interactors in the Arabidopsis proteome

Manuel González-Fuente, Sébastien Carrere, Dario Monachello, Anne-Claire Cazalé, Raka M Mitra, Ludovic Cottret, Shahid Mukhtar, Claire Lurin, Laurent Noël, Nemo Peeters
2019-01-07

Sunflower resistance to multiple downy mildew pathotypes revealed by recognition of conserved effectors of the oomycete Plasmopara halstedii

Yann Pécrix, Luis Buendia, Ludovic Legrand, Jérôme Gouzy, Ludovic Cottret, Laurence Godiard
2018-01-29

Control of primary metabolism by a virulence regulatory network promotes robustness in a plant pathogen.

Ludovic Cottret, Stéphane Genin
2018-04-30

The Rosa genome provides new insights into the domestication of modern roses

Jérôme Gouzy, Marion Verdenaud, Ludovic Cottret, Teva Vernoux, Jérémy Just, Helene Badouin, Sébastien Carrere, Jean-Claude Caissard, Jean-Marc Aury, Annick Dubois, Antoine Larrieu, Michiel Vandenbussche, Hadi Quesneville, Adnane Boualem, Chang Liu, Sylvie Baudino, Mohammed Bendahmane, Florence Piola
2018-07-01

MetExplore: collaborative edition and exploration of metabolic networks.

Ludovic Cottret, Fabien Jourdan, Clément Frainay, Nathalie Poupin
2018-02-18

Family-Companion: analyse, visualise, browse, query and share your homology clusters

Corinne Rancurel, Ludovic Cottret, Sébastien Carrere
2018

Evolutionary History of Plant LysM Receptor Proteins Related to Root Endosymbiosis

Ludovic Cottret
2018-10-24

LysM Receptor-Like Kinase and LysM Receptor-Like Protein Families: An Update on Phylogeny and Functional Characterization

Luis Buendia, Ludovic Cottret
2017-05-22

The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

Jérôme Gouzy, Erika Sallet, Helene Badouin, Florent Murat, Spencer Staton, Ludovic Cottret, Ludovic Legrand, Yannick Lippi, John M Burke, Loren H. Rieseberg, Nicolas B Langlade, Aurélie Bérard, Arnaud Bellec, Christine Lelandais-Brière, Sébastien Carrere, Baptiste Mayjonade, Thomas Faraut, Stéphane Muños
2017-09-21

Genomic Prediction of Sunflower Hybrids Oil Content

Sébastien Carrere, Ludovic Cottret, Ludovic Legrand, Nicolas B Langlade
2017-09-15

MetExploreViz: web component for interactive metabolic network visualization

Ludovic Cottret, Fabien Jourdan, Clément Frainay, Nathalie Poupin
2016-05-23

A Laser Dissection-RNAseq Analysis Highlights the Activation of Cytokinin Pathways by Nod Factors in the Medicago truncatula Root Epidermis

Jérôme Gouzy, Marie-Francoise Jardinaud, Stéphane Boivin, Nathalie Rodde, Olivier Catrice, Anna Kisiała, Brice Roux, Ludovic Cottret, Erika Sallet, Erika Sallet, Neil Emery, Pascal Gamas, Florian Frugier, Sandra Moreau
2016-10-12

A Resource Allocation Trade-Off between Virulence and Proliferation Drives Metabolic Versatility in the Plant Pathogen Ralstonia solanacearum

Jérôme Gouzy, Rémi Peyraud, Ludovic Cottret, Stéphane Genin
2016-10-31

Reprogramming of DNA methylation is critical for nodule development in Medicago truncatula

Erika Sallet, Ludovic Cottret, Marie-Francoise Jardinaud, Pascal Gamas, Céline Noirot, Karine Gallardo
2015-12-15

FlexFlux: combining metabolic flux and regulatory network analyses

Ludovic Cottret, Rémi Peyraud
2014-02-24

An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing

Erika Sallet, Jérôme Gouzy, Marie-Francoise Jardinaud, Ludovic Cottret, Sébastien Carrere, Fernanda de Carvalho-Niebel, Claude Bruand, Pascal Gamas, Frédéric Debellé, Laurent Sauviac, Sandra Moreau, Delphine Capela
2014-06-26

Identification and phylogenetic analyses of VASt, an uncharacterized protein domain associated with lipid-binding domains in Eukaryotes

Ludovic Cottret, Sylvain Raffaele
2014-10-09

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

Ludovic Cottret, Fiona Achcar, Rainer Breitling, Darren J Creek, Kathryn Crouch, Harry P de Koning, Hubert Denise, Charles Ebikeme, Alan Fairlamb, Michael J. Ferguson, Michael L. Ginger, Christiane Hertz-Fowler, Eduard J Kerkhoven, Pascal Mäser, Paul A.M. Michels, Derek P. Nolan, Fatima Silva-Franco, Martin C Taylor, Michael D. Urbaniak, Isabel Vincent, Susan Wyllie, Fred Opperdoes, Michael P. Barrett, Fabien Jourdan
2013-10-27

Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure

Cecilia Coimbra Klein, Ludovic Cottret, Fabien Jourdan, Andrea Marino, Marie-France Sagot, Leen Stougie
2012-08-31

Exploration of the core metabolism of symbiotic bacteria

Cecilia Coimbra Klein, Ana Tereza R Vasconcelos, Ludovic Cottret, Marie-France Sagot
2012-11-20

Transcriptome database resource and gene expression atlas for the rose

Jérôme Gouzy, Annick Dubois, Sylvie Baudino, Ludovic Cottret, Sébastien Carrere
2012-07-10

Algorithms and complexity of enumerating minimal precursor sets in genome-wide metabolic networks.

Ludovic Cottret, Marie-France Sagot, Leen Stougie
2012-07

Systrip: A Visual Environment for the Investigation of Time-series Data in the Context of Metabolic Networks

Ludovic Cottret
2012-10

Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets

Andrea Marino, Ludovic Cottret, Marie-France Sagot, Leen Stougie
2011

A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations

Amparo Latorre, Vicente Pérez-Brocal, Araceli Lamelas, Ludovic Cottret, Stefano Colella, Yvan Rahbé
2011-04-07

CycADS: an annotation database system to ease the development and update of BioCyc databases

Toni Gabaldón, Stefano Colella, Ludovic Cottret, Yvan Rahbé, Marie-France Sagot, Jaime Huerta-Cepas
2010-01-06

Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining

Ludovic Cottret, Fabien Jourdan, Michael P. Barrett
2010-09-02

Graph-based analysis of the metabolic exchanges between two co-resident intracellular symbionts, Baumannia cicadellinicola and Sulcia muelleri, with their insect host, Homalodisca coagulata

Ludovic Cottret, Marie-France Sagot, Leen Stougie
2010-05-06

Graph methods for the investigation of metabolic networks in parasitology

Ludovic Cottret, Fabien Jourdan
2010-05-05

MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

Ludovic Cottret, Fabien Jourdan, Marie-France Sagot, Michael P. Barrett

Human - wd:Q43086539

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