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Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans.

autor

Susana Iraola-Guzmán

Cinta Pegueroles

Toni Gabaldón

2000 -

opublikowano w: Current Biology

data publikacji: 2017-12-08

język: język angielski

główny temat: Candida glabrata

Cites articles 61

Data

Tytuł

Autorzy

2017-03-23

Identification of genetic markers of resistance to echinocandins, azoles and 5-fluorocytosine in Candida glabrata by next-generation sequencing: a feasibility study

Tania Sorrell, Monica Slavin, Vitali Sintchenko
2017-03-09

Draft Genome Sequences of Candida glabrata Isolates 1A, 1B, 2A, 2B, 3A, and 3B.

Peter Gaustad
2017-05-01

Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations

Nicholas J Croucher, William P Hanage
2016-10-07

Genome Sequencing of the Pyruvate-producing Strain Candida glabrata CCTCC M202019 and Genomic Comparison with Strain CBS138.

Chao Ye
2016-08-03

Evolutionary genomics of yeast pathogens in the Saccharomycotina

Miguel A Naranjo-Ortíz, Marina Marcet-Houben
2016-04-19

Growthcurver: an R package for obtaining interpretable metrics from microbial growth curves

Kathleen Sprouffske
2016-03-29

Prevalent mutator genotype identified in fungal pathogen Candida glabrata promotes multi-drug resistance

Dominique Sanglard, Erika Shor, Kelley R Healey, Shawn R Lockhart, Jack Sobel, David S Perlin
2015-05-26

RDP4: Detection and analysis of recombination patterns in virus genomes
2015-12-17

The birth of a deadly yeast: tracing the evolutionary emergence of virulence traits in Candida glabrata

Toni Gabaldón, Laia Carreté
2015-11-05

Proteomic analysis of hyperadhesive Candida glabrata clinical isolates reveals a core wall proteome and differential incorporation of adhesins

Ichsan Ichsan, Chris G. de Koster, Oliver Bader, Piet de Groot
2015

Efficient Mating-Type Switching in Candida glabrata Induces Cell Death

Cécile Fairhead, Monique Bolotin-Fukuhara
2015-06-19

Searching and Navigating UniProt Databases

Sangya Pundir, Michele Magrane, Maria-Jesus Martin, Claire O'Donovan, UniProt Consortium
2014-12-11

Genetic and phenotypic intra-species variation in Candida albicans

Judith Berman, Matthew P Hirakawa, Richard J Bennett, Christina A Cuomo
2014-04-16

PopGenome: an efficient Swiss army knife for population genomic analyses in R

Martin J. Lercher, Bastian Pfeifer, Sebastian E Ramos-Onsins
2014-04-01

Trimmomatic: a flexible trimmer for Illumina sequence data

Björn Usadel, Anthony M. Bolger
2013-10-01

From FastQ data to high confidence variant calls: the Genome Analysis Toolkit best practices pipeline

Stacey Gabriel, David Altshuler, Eric Banks, Mark DePristo, Ami Levy Moonshine, Khalid Shakir, Chris Hartl, Ryan Poplin
2013-12-09

Genomic sequence diversity and population structure of Saccharomyces cerevisiae assessed by RAD-seq

Aimée M Dudley, Patrick May, Justin C Fay
2013-10-01

Assembling single-cell genomes and mini-metagenomes from chimeric MDA products

Jeffrey S. McLean, Alla Lapidus, Ramunas Stepanauskas, Tanja Woyke, Anton Bankevich, Alexander V. Sirotkin, Alexey A. Gurevich, Anton Korobeynikov, Scott R Clingenpeel, Max A. Alekseyev, Roger S Lasken, Pavel A. Pevzner
2013

Comparative genomics of emerging pathogens in the Candida glabrata clade

Patrick Wincker, Toni Gabaldón, Julie Poulain, Arnaud Couloux, Eric Pelletier, Christiane Bouchier, Laurence Ma, Cécile Fairhead, Marina Marcet-Houben, Monique Bolotin-Fukuhara, Amélie Pinard, Tiphaine Martin, Cécile Neuvéglise, Éric Westhof, Christian Marck, Olivier Lespinet, Sylvie Arnaise, Hennequin Christophe
2013-02-08

Adhesins in human fungal pathogens: glue with plenty of stick

Piet de Groot, Oliver Bader
2012-12-27

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
2012-12-20

Gross karyotypic and phenotypic alterations among different progenies of the Candida glabrata CBS138/ATCC2001 reference strain

Oliver Bader, Piet de Groot
2012-12-01

Hidden killers: human fungal infections

David W. Denning, Neil A. R. Gow, Mihai Netea
2012-05-01

The changing epidemiology of healthcare-associated candidemia over three decades

Daniel J. Diekema, Michael A. Pfaller
2012-05-08

EUCAST technical note on the EUCAST definitive document EDef 7.2: method for the determination of broth dilution minimum inhibitory concentrations of antifungal agents for yeasts EDef 7.2 (EUCAST-AFST).

William Hope, Cornelia Lass-Flörl, Manuel Cuenca-Estrella
2011-09-08

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

Heng Li
2011-09-01

Using OrthoMCL to assign proteins to OrthoMCL-DB groups or to cluster proteomes into new ortholog groups

Omar S. Harb, David S Roos, Christian J Stoeckert
2011-05

A framework for variation discovery and genotyping using next-generation DNA sequencing data

Mark Joseph Daly, David Altshuler, Stacey Gabriel, Manuel Antonio Rivas
2011-02-01

Mugsy: fast multiple alignment of closely related whole genomes

Samuel V Angiuoli, Steven Salzberg
2010-11-15

Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization

Isabelle Janoueix-Lerosey, Valentina Boeva, Andrei Zinovyev, Emmanuel Barillot, Jean-Philippe Vert, Olivier Delattre, Kevin Bleakley
2010-09-15

Multilocus microsatellite markers for molecular typing of Candida glabrata: application to analysis of genetic relationships between bloodstream and digestive system isolates

Cécile Fairhead, Daniel Poulain
2010-09

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

David Altshuler, Kristian Cibulskis, Stacey Gabriel, Aaron McKenna, Mark Joseph Daly, Andrey Sivachenko, Eric Banks, Andrew Kernytsky, Mark DePristo

Artykuł - wd:Q46237990

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