David U Gorkin

تعلَّم في: مدرسة طب جامعة جونز هوبكنز

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مقالات 20

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2021-01-04

Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation

Simona Bianco, Franz Meitinger, Mattia Conte, David U Gorkin, Jesse R Dixon, Mario Nicodemi, Huimin Zhao, Bing Ren
2021-10-06

An atlas of gene regulatory elements in adult mouse cerebrum

Sebastian Preissl, Yunjiang Qiu, Joshua Chiou, António Pinto-Duarte, Kyle J Gaulton, Yin Shen, Eran A. Mukamel, Margarita Behrens, Joseph R. Ecker, Bing Ren, Jacinta Lucero, David U Gorkin, Jee Yun Han
2020-07-29

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Jill Moore, Michael Purcaro, Charles B Epstein, Rajinder K Kaul, David U Gorkin, Yin Shen, Mark Mackiewicz, Ali Mortazavi, Cheryl A Keller, Diane E. Dickel, Juan Carlos Rivera-Mulia, Joel Rozowsky, Axel Visel, Gene W Yeo, Christopher Burge, David M Gilbert, Job Dekker, John L. Rinn, Eric Mendenhall, Joseph R. Ecker, Manolis Kellis, Robert J Klein, Anshul Kundaje, Peggy Farnham, J. Michael Cherry, Bing Ren, Len A. Pennacchio, Michael P. Snyder, Bradley Bernstein, Ross Hardison, Zhiping Weng, باربرا جيه وولد, Thomas R. Gingeras, مارك بندر غريستاين, Roderic Guigó i Serra, Richard M. Myers, Brenton R. Graveley, John Stamatoyannopoulos, ENCODE Project Consortium, كاري تشيس ديفيس, Trupti Kawli, Alexander Dobin
2019-04-16

Multi-platform discovery of haplotype-resolved structural variation in human genomes

Ashley D Sanders, Xuefang Zhao, David Porubsky, Tobias Rausch, Eugene J Gardner, Li Guo, Robert E Handsaker, Susan Fairley, Aaron M Wenger, Danny Antaki, Peter A Audano, Xintong Chen, Chen-Shan Chin, Zechen Chong, Deanna M. Church, لورا كلارك, David U Gorkin, Victor Guryev, Haynes Heaton, Jonas Korlach, Joyce Lee, Sascha Meiers, Katherine M Munson, Fábio C P Navarro, Yunjiang Qiu, Ernesto Lowy, Sergei Yakneen, Bing Ren, Paul Flicek, Ken Chen, Pui-Yan Kwok, Jonathan Sebat, Xinghua Shi, Tobias Marschall, Jan Korbel, Evan E. Eichler, Steven A McCarroll, مارك بندر غريستاين, Gabor T Marth, Adrian M Stütz, Fereydoun Hormozdiari, Mark J P Chaisson
2019-05-07

Pancreatic islet chromatin accessibility and conformation reveals distal enhancer networks of type 2 diabetes risk

Joshua Chiou, Jian Yan, Yunjiang Qiu, Nikita Kadakia, Liliana Minichiello, David U Gorkin, Kelly A. Frazer, Bing Ren, Kyle J Gaulton, Nicholas K Vinckier, Jee Yun Han, Anthony Aylward, Mei-Lin Okino
2019-11-28

Common DNA sequence variation influences 3-dimensional conformation of the human genome

Joshua Chiou, Bing Ren, David U Gorkin, Kyle J Gaulton
2018-02-12

Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation

Diane E. Dickel, Axel Visel, Len A. Pennacchio, Sebastian Preissl, Rongxin Fang, David U Gorkin, Yanxiao Zhang, Kun Zhang, Bing Ren
2018-03-01

Author Correction: Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation.

Diane E. Dickel, Axel Visel, Len A. Pennacchio, Sebastian Preissl, David U Gorkin, Yanxiao Zhang, Kun Zhang, Bing Ren
2017-02-13

Improved regulatory element prediction based on tissue-specific local epigenomic signatures

David U Gorkin, Diane E. Dickel, Axel Visel, Joseph R. Ecker, Len A. Pennacchio
2016-10-05

Genome-wide compendium and functional assessment of in vivo heart enhancers

Brandon J Mannion, David U Gorkin, Diane E. Dickel, Axel Visel, Marco Osterwalder, Edward M. Rubin, Len A. Pennacchio
2016-06-01

Chromatin Domains: The Unit of Chromosome Organization

David U Gorkin
2015-06-15

A method to predict the impact of regulatory variants from DNA sequence

Dongwon Lee, David U Gorkin
2015-07-23

Genomic analysis reveals distinct mechanisms and functional classes of SOX10-regulated genes in melanocytes

David U Gorkin, Dawn E Watkins-Chow, Stacie K Loftus, William J Pavan, Dorothy Bennett, Alexias Safi, Gregory E. Crawford, Lingyun Song, Derek Gildea, Temesgen D Fufa
2015-08-01

CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function

أدريان كرينر, Ya Guo, David U Gorkin, Inkyung Jung, Tom Maniatis
2014-06-01

The 3D genome in transcriptional regulation and pluripotency

David U Gorkin
2014-03-12

Genetics: Closing the distance on obesity culprits

David U Gorkin
2013-11-21

A polymorphism in IRF4 affects human pigmentation through a tyrosinase-dependent MITF/TFAP2A pathway

Christian Praetorius, David U Gorkin, Erna Magnúsdóttir, Sean Davis, M Raza Zaidi, Martin Sigurdsson, Stacie K Loftus, Tolga Emre, William J Pavan, Robert A. Cornell, Aaron G Smith, David E. Fisher
2012-09-27

Integration of ChIP-seq and machine learning reveals enhancers and a predictive regulatory sequence vocabulary in melanocytes

Dongwon Lee, David U Gorkin, Stacie K Loftus, William J Pavan
2011-06-14

SOX10 directly modulates ERBB3 transcription via an intronic neural crest enhancer

David U Gorkin, Stacie K Loftus, William J Pavan, John Svaren, Anthony Antonellis
2009-11-01

Oligodendroglial and pan-neural crest expression of Cre recombinase directed by Sox10 enhancer

David U Gorkin, Stacie K Loftus, William J Pavan, Anthony Antonellis, John P Gearhart

Human - wd:Q55302671

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