Inventaire - your friends and communities are your best library

A comparison of phasing algorithms for trios and unrelated individuals

Author

Gonçalo Abecasis

Zhaohui Steve Qin

Eleazar Eskin

Shin Lin

Jonathan Marchini

Peter Donnelly

Eran Halperin

Published in: American Journal of Human Genetics

Date of publication: January 26, 2006

Language: English

Main subject: algorithm

Bibliographic databases:

Cites articles 45

Date

Title

Authors

January 1, 1985

Estimation of myriad haplotype frequencies
January 1, 1987

The sampling theory of neutral alleles and an urn model in population genetics
November 1, 1988

On measures of gametic disequilibrium
March 1, 1990

Inference of haplotypes from PCR-amplified samples of diploid populations
August 1994

Identity-by-descent and association mapping of a recessive gene for Hirschsprung disease on human chromosome 13q22
March 1, 1995

An E-M algorithm and testing strategy for multiple-locus haplotypes
September 1, 1995

HAPLO: a program using the EM algorithm to estimate the frequencies of multi-site haplotypes
September 1995

Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population
January 1, 1998

Fine genetic mapping using haplotype analysis and the missing data problem
January 1, 2000

A practical algorithm for optimal inference of haplotypes from diploid populations
August 22, 2000

Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data
November 26, 2001

Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms
November 1, 2001

Estimating recombination rates from population genetic data
May 1, 2001

Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease

, , , , ,
February 1, 2001

A chronology of fine-scale gene mapping by linkage disequilibrium
April 10, 2001

Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach
March 9, 2001

A new statistical method for haplotype reconstruction from population data
January 1, 2001

Inference of haplotypes from samples of diploid populations: complexity and algorithms
October 2001

Genetic variation in the 5q31 cytokine gene cluster confers susceptibility to Crohn disease

, , , , , , , , , , , , ,
April 1, 2001

Haplotypes vs single marker linkage disequilibrium tests: what do we gain?
October 1, 2001

Haplotype tagging for the identification of common disease genes

, ,
October 9, 2002

Detecting recent positive selection in the human genome from haplotype structure

, , , , , , , , ,
October 17, 2002

Haplotype inference in random population samples

,
November 1, 2002

Partition-ligation-expectation-maximization algorithm for haplotype inference with single-nucleotide polymorphisms
April 1, 2003

Efficient reconstruction of haplotype structure via perfect phylogeny

, ,
December 1, 2003

Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data
October 20, 2003

A comparison of bayesian methods for haplotype reconstruction from population genotype data
January 1, 2003

Bounds on the minimum number of recombination events in a sample history
January 1, 2003

Detecting disease associations due to linkage disequilibrium using haplotype tags: a class of tests and the determinants of statistical power
October 16, 2004

Coalescent-based association mapping and fine mapping of complex trait loci
July 15, 2004

Haplotype and missing data inference in nuclear families
April 1, 2004

The fine-scale structure of recombination rate variation in the human genome

, , , ,

Article -

Welcome to inventaire

The library of your friends and communities

You are offline