John C Detter

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2016-09-10

Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34.

Natalia N. Ivanova, Nikos C. Kyrpides, Alla Lapidus, Tijana Glavina Del Rio, Miriam Land, Ricardo Cavicchioli, Sam Pitluck, Iain J. Anderson, Lynne A. Goodwin, Loren Hauser, Susan Lucas, Hope Tice, John C Detter, Alex Copeland, David Sims, David Bruce, Carl Woese, Cliff Han, Eileen Dalin, Frank W. Larimer
2015-03-12

High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater

Miriam Land, Nikos C. Kyrpides, Natalia N. Ivanova, Roxanne Tapia, Tanja Woyke, Cliff Han, Weimin Wu, Jan-Fang Cheng, Susan Lucas, John C Detter, Olga Chertkov, Romy Chakraborty, Loren Hauser, Terry C Hazen, Matthew W. Fields, Ioanna Pagani, Brittany Held, Lin Peters, Samuel Pitluck, Hannah L Woo, Paramvir S Dehal, Dylan Chivian, Lynne A. Goodwin, Natalia Mikhailova, Craig Criddle
2014-08

Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

Jonathan Eisen, Jun Wang, Jean Weissenbach, Julian Parkhill, Alla Lapidus, Hans-Peter Klenk, Tanja Woyke, Philip Hugenholtz, Markus Göker, Victor Markowitz, Frank Oliver Glöckner, Antoine Danchin, Paul Gilna, Rita R. Colwell, David Smith, Peter Dawyndt, Uli Stingl, Ramon Rosselló-Mora, Janet K Jansson, George M. Garrity, Michael Wagner, William B. Whitman, Claire M. Fraser, George Weinstock, Rob Knight, Nikos C. Kyrpides, Wen-Jun Li, Mark Morrison, Yu-Guang Zhou, Karen E. Nelson, Norman R. Pace, John C Detter, Rudolf Amann, Jack A Gilbert, Jongsik Chun, Edward F. DeLong, Moriya Ohkuma, Johannes Sikorski, Patrick S Chain, Brian W. Beck, Paul de Vos, Stanislav Dusko Ehrlich, Folker Meyer, Steven W Rick, Owen White, Dawn Field, Christos Ouzounis, Richard A Gibbs
2014

Arrangement of the Clostridium baratii F7 toxin gene cluster with identification of a σ factor that recognizes the botulinum toxin gene cluster promoters

J Chris Detter
2014-05-15

Genome sequence of the Thermotoga thermarum type strain (LA3(T)) from an African solfataric spring

Markus Göker, Natalia N. Ivanova, Miriam Land, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Tijana Glavina Del Rio, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Jan-Fang Cheng, Iain J. Anderson, Cliff Han, Konstantinos Mavromatis, Loren Hauser, Krishna Palaniappan, Matt Nolan, Amy Chen, Susan Lucas, Cynthia D Jeffries, Hope Tice, John C Detter, Carmen Scheuner, Manfred Rohde, Ioanna Pagani, Yun-Juan Chang, Ahmet Zeytun, Konstantinos Liolios, Stefan Spring, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2014-01-25

Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252(T) isolated from marine sediment

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Alla Lapidus, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Amrita Pati, Amy Chen, John C Detter, Thorsten Brinkhoff, Olga Chertkov, Manfred Rohde, Meinhard Simon, Jörn Petersen, Sven Breider, Hazuki Teshima, Hajnalka Dalingault, Lynne A. Goodwin
2014-03-15

Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia

Markus Göker, Natalia N. Ivanova, Miriam Land, Stefan Spring, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Tijana Glavina Del Rio, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Boyke Bunk, Sam Pitluck, Victor Markowitz, Amrita Pati, Jan-Fang Cheng, Cliff Han, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Amy Chen, Hope Tice, John C Detter, Manfred Rohde, Ioanna Pagani, Shanmugam Mayilraj, Konstantinos Liolios, Anne Fiebig, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2014-12-08

Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and eme

Natalia N. Ivanova, Jonathan Eisen, Markus Göker, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Philip Hugenholtz, Tanja Woyke, Miriam Land, Romano Mwirichia, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Lynne A. Goodwin, Loren Hauser, Matt Nolan, Amy Chen, Cynthia D Jeffries, John C Detter, Carmen Scheuner, Krishna Palaniappan, Manfred Rohde, Ioanna Pagani, Birte Abt, Konstantinos Liolios
2013-12-15

Genome sequence of Phaeobacter inhibens type strain (T5(T)), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Amrita Pati, Amy Chen, John C Detter, Thorsten Brinkhoff, Manfred Rohde, Meinhard Simon, Karen W Davenport, Jörn Petersen, Hazuki Teshima, Hajnalka Dalingault, Sabine Gronow, Marco Dogs, Sonja Voget, Lynne A. Goodwin
2013-12-15

Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58

Marco Galardini, Matteo Brilli, Natalia N. Ivanova, Nikos C. Kyrpides, Stefano Mocali, Francesco Pini, Alessio Mengoni, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Cliff Han, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, David Bruce, Matt Nolan, Amy Chen, John C Detter, Marco Bazzicalupo, Hajnalka Kiss, Shweta Deshpande, Ioanna Pagani, Hazuki Teshima, Ernest Szeto, Kostas Mavrommatis, Emanuele G Biondi, Karen Walston Davenport, Giulia Spini, Lynne A. Goodwin
2013-04-15

Complete genome sequence of Coriobacterium glomerans type strain (PW2(T)) from the midgut of Pyrrhocoris apterus L. (red soldier bug).

Natalia N. Ivanova, Miriam Land, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Erko Stackebrandt, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Rüdiger Pukall, Loren Hauser, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Manfred Rohde, Nancy M Hammon, Ioanna Pagani, Yun-Juan Chang, Shweta Deshpande, Ahmet Zeytun, Konstantinos Liolios, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-04-15

Complete genome sequence of Halorhodospira halophila SL1.

Miriam Land, Natalia N. Ivanova, Alla Lapidus, Roxanne Tapia, Tanja Woyke, Cliff Han, Sam Pitluck, Jean F. Challacombe, Matt Nolan, John C Detter, David Bruce, Monica Misra, Krista G Reitenga, Susana F Delano, Cheryl D Gleasner, Natalia Mikhailova
2013-03-14

Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome

Chien-Chi Lo, Patrick S Chain, Shannon L Johnson, Cliff Han, J Chris Detter, Olga Chertkov, Roger S Lasken, Ashlynn R. Daughton, Mark J Novotny
2013-06-25

Genome analysis and physiological comparison of Alicycliphilus denitrificans strains BC and K601(T.).

Miriam Land, Roxanne Tapia, Howard Junca, Peter J. Schaap, Hauke Smidt, John C Detter, Loren Hauser, Hajnalka Kiss, David Bruce, Willem J.H. van Berkel, Cliff Han, Caroline M Plugge, Alfons Stams, Margreet J Oosterkamp, Teun Veuskens, A. Langenhoff, Flavia Talarico Saia, Lynne A. Goodwin, Gosse Schraa, Sander A Weelink
2013-01-24

Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin

Nikos C. Kyrpides, Natalia N. Ivanova, Tanja Woyke, Jenny Lam, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jeremy A Dodsworth, Brian P. Hedlund, Lynne A. Goodwin, Amy Chen, John C Detter, Senthil K Murugapiran, Austin I McDonald, Tracy H Erkkila, Hazuki Teshima, Konstantinos Mavrommatis, Ernest Szeto, Ioanna Pagani, Lin Peters, Cliff Han
2013-04-15

High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5(T)).

Natalia N. Ivanova, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Erko Stackebrandt, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Cliff Han, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Olga Chertkov, Manfred Rohde, David Bruce, Ioanna Pagani, Konstantinos Liolios, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-04-15

Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA(T)).

Natalia N. Ivanova, Miriam Land, Stefan Spring, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Erko Stackebrandt, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Manfred Rohde, Nancy M Hammon, Ioanna Pagani, Shweta Deshpande, Brittany Held, Konstantinos Liolios, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-04-15

Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437(T)).

Natalia N. Ivanova, Miriam Land, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Erko Stackebrandt, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Loren Hauser, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Manfred Rohde, Nancy M Hammon, Ioanna Pagani, Shweta Deshpande, Konstantinos Liolios, Sabine Gronow, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-04-15

Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1(T)), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.

Markus Göker, Natalia N. Ivanova, Miriam Land, Stefan Spring, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Loren Hauser, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, Cynthia D Jeffries, John C Detter, Carmen Scheuner, Manfred Rohde, Nancy M Hammon, Ioanna Pagani, Shweta Deshpande, Birte Abt, Monica Misra, Konstantinos Liolios, Sabine Gronow, Cliff Han, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-05-20

Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692(T)) from the alkaline Lake Magadi in the East African Rift

Natalia N. Ivanova, Miriam Land, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Carmen Scheuner, Manfred Rohde, Ioanna Pagani, Shweta Deshpande, Birte Abt, Hazuki Teshima, Brittany Held, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-05-25

Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)).

Natalia N. Ivanova, Miriam Land, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Erko Stackebrandt, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Manfred Rohde, Nancy M Hammon, Ioanna Pagani, Shweta Deshpande, Brittany Held, Konstantinos Liolios, Sabine Gronow, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-05-25

Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H(T)), and emendation of the species Turneriella parva

Natalia N. Ivanova, Miriam Land, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Erko Stackebrandt, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Chongle Pan, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Jan-Fang Cheng, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Susan Lucas, Amy Chen, John C Detter, Olga Chertkov, Manfred Rohde, Nancy M Hammon, Ioanna Pagani, Shweta Deshpande, Konstantinos Liolios, Sabine Gronow, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-09-26

Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules

Natalia N. Ivanova, Miriam Land, Tanja Woyke, Sam Pitluck, Amrita Pati, Matt Nolan, John C Detter, Olga Chertkov, David Bruce, Cliff Han, Ann M Hirsch, Lynne A. Goodwin
2013-10-04

Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336(T)), a representative of the Roseobacter clade

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Alla Lapidus, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Amrita Pati, Amy Chen, John C Detter, Thorsten Brinkhoff, Olga Chertkov, Jörn Petersen, Anne Fiebig, Sabine Gronow, Nora Buddruhs, Lynne A. Goodwin
2013-10-02

Genome sequence of Frateuria aurantia type strain (Kondô 67(T)), a xanthomonade isolated from Lilium auratium Lindl

Natalia N. Ivanova, Miriam Land, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Tijana Glavina Del Rio, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Cliff Han, Sam Pitluck, Victor Markowitz, Amrita Pati, Elke Lang, Jan-Fang Cheng, Iain J. Anderson, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Amy Chen, Hope Tice, John C Detter, Manfred Rohde, Ioanna Pagani, Konstantinos Liolios, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-09-30

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).

Miriam Land, Natalia N. Ivanova, Markus Göker, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Roxanne Tapia, Tanja Woyke, Jan P Meier-Kolthoff, Cliff Han, Sam Pitluck, Marcel Huntemann, Gabriele Pötter, Susan Lucas, John C Detter, Alex Copeland, Manfred Rohde, Lynne A. Goodwin
2013-10-03

Genome sequence of Phaeobacter daeponensis type strain (DSM 23529(T)), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Alla Lapidus, Hans-Peter Klenk, Tanja Woyke, Amrita Pati, Amy Chen, John C Detter, Thorsten Brinkhoff, Olga Chertkov, Manfred Rohde, Meinhard Simon, Patrick S Chain, Sabine Gronow, Hazuki Teshima, Anne Fiebig, Jörn Petersen, Hajnalka Dalingault, Marco Dogs, Lynne A. Goodwin
2013-10-02

Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio

Natalia N. Ivanova, Stefan Spring, Markus Göker, Jonathan Eisen, Nikos C. Kyrpides, Alla Lapidus, Hans-Peter Klenk, Tijana Glavina Del Rio, Roxanne Tapia, Philip Hugenholtz, Tanja Woyke, Jan P Meier-Kolthoff, Sam Pitluck, Victor Markowitz, Amrita Pati, Jan-Fang Cheng, Konstantinos Mavromatis, Krishna Palaniappan, Matt Nolan, Amy Chen, Hope Tice, John C Detter, Manfred Rohde, Ioanna Pagani, Hazuki Teshima, Shanmugam Mayilraj, Konstantinos Liolios, Cliff Han, James Bristow, Lynne A. Goodwin, Natalia Mikhailova
2013-07-30

Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Amrita Pati, Amy Chen, John C Detter, Thorsten Brinkhoff, Manfred Rohde, Hajnalka Kiss, Karen W Davenport, Sabine Gronow, Hazuki Teshima, Anne Fiebig, Tracy H Erkkila, Jörn Petersen, Lynne A. Goodwin
2013-07-30

Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566(T.).

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Amrita Pati, Jörg Overmann, Amy Chen, John C Detter, Silke Pradella, Thorsten Brinkhoff, Manfred Rohde, Karen W Davenport, Jörn Petersen, Hazuki Teshima, Hajnalka Dalingault, Sabine Gronow, Heike M Freese, Lynne A. Goodwin
2013-07-30

Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

Nikos C. Kyrpides, Natalia N. Ivanova, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Cliff Han, Roger Finlay, Sam Pitluck, Victor Markowitz, Amrita Pati, Marcel Huntemann, Matt Nolan, Amy Chen, John C Detter, Olga Chertkov, Hajnalka Kiss, David Bruce, Shweta Deshpande, Ioanna Pagani, Karen W Davenport, Hazuki Teshima, Ernest Szeto, Saraswoti Neupane, Nils Högberg, Sadhna Alström, Beverly Quintana, Krista G Reitenga, Yulia Kunde, Tracy H Erkkila, Kostas Mavromatis, Lynne A. Goodwin
2013-07-30

Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade,Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade

Natalia N. Ivanova, Nikos C. Kyrpides, Markus Göker, Alla Lapidus, Hans-Peter Klenk, Tanja Woyke, Patrick S Chain, Amrita Pati, Amy Chen, John C Detter, Thorsten Brinkhoff, Olga Chertkov, Manfred Rohde, Meinhard Simon, Jörn Petersen, Anne Fiebig, Paul G. Beyersmann, Sabine Gronow, Lynne A. Goodwin

Human - wd:Q83769465

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