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What is flux balance analysis?

автор

Ines Thiele

Bernhard Palsson

1957 -

опубліковано в: Nature Biotechnology

дата публікації: 2010-03

мова: англійська мова

основна тема: біотехнологія, мікробіологія

Cites articles 28

Дата

Заголовок

Автори

2010-01

A protocol for generating a high-quality genome-scale metabolic reconstruction

Ines Thiele, Bernhard Palsson
2009-11-03

Applications of genome-scale metabolic reconstructions

Matthew A Oberhardt, Bernhard Palsson
2009-02

Reconstruction of biochemical networks in microorganisms
2009-10-17

Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli

Bernhard Palsson, Adam M. Feist, Jan Schellenberger, Jeffrey D Orth, Daniel P Zielinski, Markus J Herrgård
2009-05-20

Constraints-based genome-scale metabolic simulation for systems metabolic engineering

Sang Yup Lee
2009-03-13

GrowMatch: an automated method for reconciling in silico/in vivo growth predictions

Costas D. Maranas
2009-08-17

WEbcoli: an interactive and asynchronous web application for in silico design and analysis of genome-scale E.coli model.

Dong-Yup Lee
2008-06-01

The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli

Bernhard Palsson, Adam M. Feist
2008-12-03

Genome-scale models of bacterial metabolism: reconstruction and applications
2007

Structural and functional analysis of cellular networks with CellNetAnalyzer

Steffen Klamt, Julio Saez-Rodriguez
2007-02-06

Global reconstruction of the human metabolic network based on genomic and bibliomic data

Rohith Srivas, Ines Thiele, Bernhard Palsson
2007-06-26

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

Peter D. Karp, Vassily Hatzimanikatis, Bernhard Palsson, Jennifer L. Reed, Adam M. Feist, Linda J. Broadbelt, Christopher S. Henry, Markus Krummenacker
2007

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox
2007-06-20

Optimization based automated curation of metabolic reconstructions

Costas D. Maranas
2006-11-06

Systems approach to refining genome annotation

Bernhard Palsson, Jennifer L. Reed
2004-11-01

Genome-scale models of microbial cells: evaluating the consequences of constraints

Nathan D Price, Jennifer L. Reed, Bernhard Palsson
2003

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Bernhard Palsson, Jennifer L. Reed
2003-03-01

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

Michael Hucka, Herbert M. Sauro, Адам Аркін, Igor Goryanin, Charlie Hodgman, Peter John Hunter, Navtej Juty, Nicolas Le Novère, Leslie M. Loew
2003-10

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models
2003-12-01

Optknock: a bilevel programming framework for identifying gene knockout strategies for microbial strain optimization

Costas D. Maranas
2003-11-01

MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis

Dong-Yup Lee, Sang Yup Lee
2002-03-01

Metabolic modelling of microbes: the flux-balance approach

Bernhard Palsson
2002-01-01

Characterizing the metabolic phenotype: a phenotype phase plane analysis

Bernhard Palsson
2001-02

In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data
2001-03-01

Metabolic modeling of microbial strains in silico

Igor Goryanin
2000-11-01

Robustness analysis of the Escherichia coli metabolic network.
1995-01-01

Parametric sensitivity of stoichiometric flux balance models applied to wild-type Escherichia coli metabolism

Amit Varma
1993-12-01

Metabolic capabilities of Escherichia coli: I. synthesis of biosynthetic precursors and cofactors

Amit Varma

Стаття - wd:Q28275348

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